Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3214 ATGGTCAGAAGAATATCACACCTTACCTTACTGCTTGCATTTATTTTTATTCCATACCTTGCAAGCCAGTTGGTATTTGCAAAAGGGAGAAACAATGTTAGAGAAGCTTGCAAAGTAACTAGGTATCAAAACCTTTGTATGCGCTCGCTAGCACCGTTCTCTTACAGTGCTGGAAGAGGCCCTAGCAAGTGGGCAAGGGCTGGAGTGTCGGTGACAATCGGTGAAGTTAAGAATGTCCAAGCATATCTCACAAACTTAACTAGACACGGGCGTTTAAGAGGAAGAAATAAAGTTGCACTATTAGATTGTGTCGAGACTATTGCAGATGCCCTTGATGAGCTTCATAGATCACTGAATGTGCTCAGAAGGCTTAGTAGAAGGACATTTGGTACCCAGATGGGGGACCTTAATACATGGATAAGTGCGGCACTCACAGATCAAGATACTTGCCTTGATGGGTTTCAAGGCGAAAACGGTAGGAAAATTCAATTGCTGCAAAATAGGGTTCTCAAAGCCTATTATATAACCAGTAACGCTCTAGCTCTTGTCAGTAAACTTGCCACTACAGGTCTAGGAAGCATTTCTGATCCATAG 594 0.4276 MVRRISHLTLLLAFIFIPYLASQLVFAKGRNNVREACKVTRYQNLCMRSLAPFSYSAGRGPSKWARAGVSVTIGEVKNVQAYLTNLTRHGRLRGRNKVALLDCVETIADALDELHRSLNVLRRLSRRTFGTQMGDLNTWISAALTDQDTCLDGFQGENGRKIQLLQNRVLKAYYITSNALALVSKLATTGLGSISDP* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3214 197 CDD PMEI-like_3 36 188 - -
Mtr1g3214 197 Pfam Plant invertase/pectin methylesterase inhibitor 32 182 IPR006501 GO:0004857
Mtr1g3214 197 TIGRFAM PME_inhib: pectinesterase inhibitor domain 1 186 IPR006501 GO:0004857
Mtr1g3214 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 26 181 - -
Mtr1g3214 197 SMART PMEI_2 28 182 IPR006501 GO:0004857
Mtr1g3214 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 186 IPR035513 -
Mtr1g3214 197 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 26 181 - -
Mtr1g3214 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 188 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3214 Mtr-Chr1 43434146 43435626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3214 33 194 Carbohydrate Esterase AT3G14310 32.335 2.92e-19 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3214 - - mtr:MTR_1g088540 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3214 1 43434146 43435626 Mtr1g3214 1 43434146 43435626 ECH