Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3209 ATGAGCGGAGTGAAGGGTAAGAAGAAGGGAACAAGCTTCGTGATCGATTGCGCGAAGCCAGTTGAGGATAAGATTATGGATATCGCTTCCCTCGAGAAGTTTCTTCAGGAGAGGATTAAAGTTGGCGGTAAAGCTGGTGCTCTCGGTGATTCCGTTACTGTTACTCGTGAAAAGTCCAAGATCACCGTTACCTCCGACAGCAATTTCTCTAAAAGGTATTTGAAGTACTTGACCAAGAAGTACTTGAAAAAGCACAATGTGAGGGATTGGCTTCGTGTTATTGCATCCAACAAGGACCGCAATATCTATGAGTTGAGATACTTCAACATCGCTGAGAATGAGGGTGAAGAGGAAGACTAA 360 0.4417 MSGVKGKKKGTSFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3209 119 Gene3D - 2 119 IPR038526 -
Mtr1g3209 119 PANTHER 60S RIBOSOMAL PROTEIN L22-2-LIKE 2 119 - -
Mtr1g3209 119 PANTHER 60S RIBOSOMAL PROTEIN L22 2 119 IPR002671 GO:0003735|GO:0005840|GO:0006412
Mtr1g3209 119 Pfam Ribosomal L22e protein family 9 117 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3209 Mtr-Chr1 43393897 43395514 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3209 4 119 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 89.655 6.95e-65 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3209 K02891 - gmx:100500073 219.164