Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3208 ATGTATAAAATGATTGGGTACTTATCCAGTTTTCTGGCTCATGATGAGAAATGTGAAAGCTATTTGATATTTAGTGGAGAAACTAATCTTGGAAATAGTGTTAGGATATTGTTGTATTTTCTTGGTCTTGCTTATTGTTTTATTGGATTATCGGCTATAACATCCCGATTCTTTCAATCTATGGAAAATGTGGTCAAGCATTCAAGGGAGGTTGTGGTGATAGATCCTGTTACTAAAGCTGAGACTATTAGACATGAGAAAGTTTGGAATTATACAATTGCAGATATTAGTTTGTTGGCGTTTGGAACTAGCTTTCCTCAGATTTCATTAGCTACTATTGATGCTATACGGAATCTAGGGGACCTGTATGCTGGAGGTTTGGGACCTGGAACACTCGTTGGTTCTGCTGCGTTTGATCTCTTCCCCATCCACGCTGTTTGTGTGGTAATTCCAAAAGCAGGAGAGTTGAAAAAGATTGCAGATCTAGGAGTATGGATAGTAGAGCTATTTTGGTCATTTTGGGCTTATATTTGGTTATACATAATTTTGGAGGTATGGACTCCAAACGTGATAACTCTGTGGGAGGCCTTGTTGACAGTACTTCAGTATGGATTACTGTTGATTCATGCTTATGCTCAAGACAAACGTTGGCCCTATATTTCTCTACCTATTGCAAGAGATGAGAGGCCAGAGGATTGGGTGCCAGAAGAGACTCCTAAACAGAAGTCCCATGAGCGAGTGGAGTGCTCTGAAATAAATCATTTTAATGAAGAAAACGGGGACACTGTTGATATTTTTTCCATTCATTCAGAAAACCCCAGAGACATGTCGTATGTAAGAGTACCTCAAATAGATGATGCAGAAAATTCTGACAAAGTTATAGAAACGAGGCTGGAGGATACATGTTTGCTTACAATTTGGAAACAACAATTTGTGGATGCATTGACGGTGGAGAGCCAAGAATCTAAAAAAATGAACAATATCTATATCCGCACAGCTCGGATTTTCTGGCAGCTGTTGCTTTTACCATGGAGATTTATGTTTGCTTTTGTTCCCCCATGCCATATTGCTCATGGATGGATATCTTTCATTTGCTCTCTACTTTTCATCAGTGGGATAGCTTATATTGTGACCAAGATAACGGATCTTATAAGTTGTGTCACAGGAATAAATGCTTACGTCATAGCATTTACAGCACTAGCCAGTGGAACCTCGTGGCCTGATTTAGTGGCGAGCAAGATTGCTGCTAAACGTCAAAAAACAGCAGATTCTGCAATTGCAAACATCACTTGCAGCAACTCAGTGAATATATATGTTGGCATTGGTGTTCCTTGGCTTATAGATACTTTGTACAACTTCATAGCATATAGACAACCTCTCCGAATCCAAAATGCAGGGGGACTTAGCTTTTCATTGATTGTTTTCTTTGCCACTTCTGTTGGATGTATCTCAGTTTTGGTTGCTAGGCGTATAGTTTTCGGTGCAGAGCTTGGAGGACCAAGGCTTTGGGCATGGATTACCTGTGCGTTTTTCATGCTGCTGTGGATTATTTTTGTTGTACTATCTTCACTTAAGGTTTCCGGATTCATTTAG 1593 0.3967 MYKMIGYLSSFLAHDEKCESYLIFSGETNLGNSVRILLYFLGLAYCFIGLSAITSRFFQSMENVVKHSREVVVIDPVTKAETIRHEKVWNYTIADISLLAFGTSFPQISLATIDAIRNLGDLYAGGLGPGTLVGSAAFDLFPIHAVCVVIPKAGELKKIADLGVWIVELFWSFWAYIWLYIILEVWTPNVITLWEALLTVLQYGLLLIHAYAQDKRWPYISLPIARDERPEDWVPEETPKQKSHERVECSEINHFNEENGDTVDIFSIHSENPRDMSYVRVPQIDDAENSDKVIETRLEDTCLLTIWKQQFVDALTVESQESKKMNNIYIRTARIFWQLLLLPWRFMFAFVPPCHIAHGWISFICSLLFISGIAYIVTKITDLISCVTGINAYVIAFTALASGTSWPDLVASKIAAKRQKTADSAIANITCSNSVNIYVGIGVPWLIDTLYNFIAYRQPLRIQNAGGLSFSLIVFFATSVGCISVLVARRIVFGAELGGPRLWAWITCAFFMLLWIIFVVLSSLKVSGFI* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3208 530 PANTHER SODIUM/CALCIUM EXCHANGER 12 217 - -
Mtr1g3208 530 PANTHER SODIUM/CALCIUM EXCHANGER 306 530 - -
Mtr1g3208 530 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 12 217 - -
Mtr1g3208 530 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 306 530 - -
Mtr1g3208 530 Gene3D - 91 225 IPR044880 -
Mtr1g3208 530 Gene3D - 312 524 IPR044880 -
Mtr1g3208 530 Pfam Sodium/calcium exchanger protein 39 211 IPR004837 GO:0016021|GO:0055085
Mtr1g3208 530 Pfam Sodium/calcium exchanger protein 359 522 IPR004837 GO:0016021|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3208 9 530 Antiporters AT2G47600 70.833 0.0 770
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3208 K03452 K05849 gmx:100792839 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3208 1 43381837 43388372 Mtr1g3208 1 43381837 43388372 ECH