Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3155 ATGATTTTTAATGATAGTGTTTCAATACAAGCTGTTAATGGTAATGGAGATCTAATAAGGAATGAGGGAGCTGTATCTTGCAAGGATCAAGCTGTTGGTTCAAGTTTGAATATTCATGATACTCCATATTTGATTCATTGCTACCCCATTGATATTATGGGAATAGAATCGGTGCATGTGTTAGCTGTCCCACAAAATGGATCTCTCATCTTTAATCCAAGTCATAAAGGAAAGGGATTGACACTCTTGATTGTAATGATGGTGATGATATTTATTGCTATCTTGAGTTTTCTATTCTTGAATCTTGGAGTGACAAAGAGAGAAATGCATTTGTGTGCATCACTCATGCAACAAAAGGAAGCCACAGAACAAGCTGAGAGAAAGAATACCAATAAGAGCCTTGCTTTTGCTACTGCTAGCCATGATCTTCGTGCTTATCTTGCTGGCCTTATTGGTTTGATTGAAATGTCTTCTAAATTAGTTGTTACTAATTCAAAATTGGAGACCAATTTGAAACCAAGTTCAGAATTGGAGACCAATTTAAAACAAATGGATAATTGTGCCCAAGATTTGCTTGGACTGTTAAATTCTATACTGGACACAAGCAAGATTGAGGCAGGAAAAATGCAACTAGAGGAAGAGGAATTTGATTTATCCAATCTCCTTGAGGATGTAGTTGATTTGTACCATCCAATGGCAATGAAGAAAGGTGTAGAAGTTGTATTGGACTCTTGTAATGGCTCAGTGATCAAACATTCACGTGTGAAAGGTGATAGGAGAAAATTGAAGCAAGTTTTGTGTAACTTGCTAAGCAATGCTGTTAAATTTACTGATGAAGGGCACATAACAGTTAGGGCATGGACTCAGAAGGCCAAATTGCAGAACTCAAAAACCAAGACTAACCACAAGAGTGTTATGAAACATTTGTCTTGGTTGTTTAATAAGAAAGACAAAGAATGTGAAGACATAGAAGCTGTGAATTTAGCCCAACAAGATCCATGTCTTATGGATTTTGTATTTGAAGTGGATGATACAGGGAAAGGAATTCCTAAAGAGAATCACAAGTCAGTGTTTGAGAATTATGTTCAAGTCAAAGAGAATTCTGTTGGTCAAGTAGGAACTGGCTTGGGACTTGGGATTGTGCAGTCATTGGTTCGTTTGATGCATGGAGACATTGGTATTGTGGACAAGGAAGTTGGCAAAAGAGGAACATGCTTCAAGTTCAATGTGCTTCTCACCTTATGTGAGAATGAGACAGTGAATTATGAGTATGGATCAACCGCAGGTGACAAAAGCCAAACTCTAGAGAAAAAGTTAACAATTCGCACTGCTAGTTCTGGTTCAAGCATTTGTTCTTTGAGTCCAAAACTCCATGTTAGCCCCTCTCAGAGGCCCGAGCCTTCACATGTCATTCTTTACATTACTGATGAGGAAAGAAGAAGAACTTCGCAGTTGTTCATAGAAAGCTTAGGGATTAAAGTCAAGGTTGTGAAGAGTAGAAACCATCTAGTTCATACTCTCAAGAAGATCAAAAAAGAAAAGGGTGACCATCTCAGTGATCAAAGTTCACCGGAGTCTTCGGAGATGAGTTCTAGGTGTACATCTTATAGCTCTTCTTGTAGTAGAAGAGTTCCTTTCAAAGCTATGGATCATGGAAATGAATATCTATCTTCGATGTTCAAGAAAAACAATGGAGCTGCACCAAGTTTTGTTCTGATTATCATTGATGCAAATGCAGGACCATTTTCTAAGCTTTGTAAGATTGTGTCAAACTTCAAGAAAGATCTTCTCAATCCTAGTAAAGTTGTTTGGTTGGAAAAGCCTTTTGAGAGTAGTGTTGATTACCAAGCAATTGATCAAGATGATAATGTGATATCAAAACCATTTCATGGTAGTAGATTGTTCCAAGTTATTAAGCTTCTTCCTGAGTTTGGTGGTAGTTGGATAAGCAATTCTAGTAAACCAAGAAATGAATTGAGATCACAAGAACCAACCAATGATGAAAGTGTGTGTCTAAGTGTGGGACAATGCTGGAAGGGAACACAAAAATCCTATGTTAAAATGGGAAGAAAAGGTTCTGTTCATCAAGGTGAAATAGAAGAATCTGGAGGAGAATCAAGCAATCCTGAACCATTAAGTGGAAAGAAGTTTTTGGTTGTTGATGATAGTCCTATGCTGAGAAAGATTTGTATGGCTACTTTGAGATCTCTTGGTGTGACTACTATTGACCAATGTGAGAATGGTGAAGAGGCTGTGAGAACTGTTCAAGAGGGTTTAACCAAGGATTTTACTAATCCTCCTTATGATTATATCTTAATGGATTGTCAGATGCCAGTGAAGGATGGGTTTGAGGCAACAAGGGAGATAAGAGAGATGGAGAAACAGTATGGTCTTCACATTTCTATCATTGCATTATCTGCTGAAATTGACAAGCTGACCACAGAGACTGGAATGGACTTCCACATTACCAAACCTATCAAGAAAGAGCATTTACTTAAAGCTATTACATACATAGAGAATAGTGACATATTGTAA 2535 0.3759 MIFNDSVSIQAVNGNGDLIRNEGAVSCKDQAVGSSLNIHDTPYLIHCYPIDIMGIESVHVLAVPQNGSLIFNPSHKGKGLTLLIVMMVMIFIAILSFLFLNLGVTKREMHLCASLMQQKEATEQAERKNTNKSLAFATASHDLRAYLAGLIGLIEMSSKLVVTNSKLETNLKPSSELETNLKQMDNCAQDLLGLLNSILDTSKIEAGKMQLEEEEFDLSNLLEDVVDLYHPMAMKKGVEVVLDSCNGSVIKHSRVKGDRRKLKQVLCNLLSNAVKFTDEGHITVRAWTQKAKLQNSKTKTNHKSVMKHLSWLFNKKDKECEDIEAVNLAQQDPCLMDFVFEVDDTGKGIPKENHKSVFENYVQVKENSVGQVGTGLGLGIVQSLVRLMHGDIGIVDKEVGKRGTCFKFNVLLTLCENETVNYEYGSTAGDKSQTLEKKLTIRTASSGSSICSLSPKLHVSPSQRPEPSHVILYITDEERRRTSQLFIESLGIKVKVVKSRNHLVHTLKKIKKEKGDHLSDQSSPESSEMSSRCTSYSSSCSRRVPFKAMDHGNEYLSSMFKKNNGAAPSFVLIIIDANAGPFSKLCKIVSNFKKDLLNPSKVVWLEKPFESSVDYQAIDQDDNVISKPFHGSRLFQVIKLLPEFGGSWISNSSKPRNELRSQEPTNDESVCLSVGQCWKGTQKSYVKMGRKGSVHQGEIEESGGESSNPEPLSGKKFLVVDDSPMLRKICMATLRSLGVTTIDQCENGEEAVRTVQEGLTKDFTNPPYDYILMDCQMPVKDGFEATREIREMEKQYGLHISIIALSAEIDKLTTETGMDFHITKPIKKEHLLKAITYIENSDIL* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3155 844 Pfam His Kinase A (phospho-acceptor) domain 134 207 IPR003661 GO:0000155|GO:0007165
Mtr1g3155 844 Gene3D - 209 419 IPR036890 -
Mtr1g3155 844 SMART HKATPase_4 257 414 IPR003594 -
Mtr1g3155 844 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 119 209 IPR036097 GO:0000155|GO:0007165
Mtr1g3155 844 MobiDBLite consensus disorder prediction 514 538 - -
Mtr1g3155 844 ProSiteProfiles Histidine kinase domain profile. 138 414 IPR005467 -
Mtr1g3155 844 PANTHER TWO-COMPONENT HISTIDINE KINASE 37 839 - -
Mtr1g3155 844 Pfam Response regulator receiver domain 718 835 IPR001789 GO:0000160
Mtr1g3155 844 MobiDBLite consensus disorder prediction 692 714 - -
Mtr1g3155 844 MobiDBLite consensus disorder prediction 522 538 - -
Mtr1g3155 844 SUPERFAMILY CheY-like 713 838 IPR011006 -
Mtr1g3155 844 SMART HisKA_10 131 207 IPR003661 GO:0000155|GO:0007165
Mtr1g3155 844 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 257 412 IPR003594 -
Mtr1g3155 844 PRINTS Bacterial sensor protein C-terminal signature 338 352 IPR004358 GO:0016310|GO:0016772
Mtr1g3155 844 PRINTS Bacterial sensor protein C-terminal signature 356 366 IPR004358 GO:0016310|GO:0016772
Mtr1g3155 844 PRINTS Bacterial sensor protein C-terminal signature 372 390 IPR004358 GO:0016310|GO:0016772
Mtr1g3155 844 CDD REC_hyHK_CKI1_RcsC-like 717 835 - -
Mtr1g3155 844 CDD HisKA 129 203 IPR003661 GO:0000155|GO:0007165
Mtr1g3155 844 PANTHER HISTIDINE KINASE CKI1 37 839 - -
Mtr1g3155 844 Gene3D - 117 208 - -
Mtr1g3155 844 Gene3D - 694 841 - -
Mtr1g3155 844 SMART REC_2 715 835 IPR001789 GO:0000160
Mtr1g3155 844 ProSiteProfiles Response regulatory domain profile. 716 839 IPR001789 GO:0000160
Mtr1g3155 844 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 196 409 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3155 Mtr-Chr1 42824835 42829737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3155 33 840 Histidine Kinase Gene Family AT2G47430 42.523 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr1g3155 HATPase_c 1.6e-25 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3155 - - cam:101504256 942.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3155 1 42824835 42829737 Mtr1g3155 1 42824835 42829737 ECH