Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3150 ATGGCTTCGATTCAACGTCCTGTAAGTTCATGCTCTGCTTCAGGAGGTTCAGACGGTATGGATCTACAAATCGACGAGCGAAAACGCAAGAGGATGCTGTCAAACCGTGAATCTGCGAGACGATCCAGACTGAGGAAGCAGCAACAGGTTGAAGATCTAACCGGAGAAGCCGGTAAATTGAAAATCGAGAATGACCGTCTCGCGAGGAGCATAAAGGCAACGGAGGAAGCGTATCTGAAGATGGAAGCTGCTAATGATGTTATCAGAGCGCAGACTAGGGAATTGGAGGCTCAGTTTCGCTTTTTGAATTCTGTTATTGATGCTGCTGCTGCTGAAGAGGCTAATAGTTTCTCCGTTGATGATGTGCCTTTGATTGATGATCCTCTTCTCAAACCTTGGTTCATACCTTATCCAAATTATTCTATGGCATCGCATGAAATGATGCTGCGTTGA 453 0.457 MASIQRPVSSCSASGGSDGMDLQIDERKRKRMLSNRESARRSRLRKQQQVEDLTGEAGKLKIENDRLARSIKATEEAYLKMEAANDVIRAQTRELEAQFRFLNSVIDAAAAEEANSFSVDDVPLIDDPLLKPWFIPYPNYSMASHEMMLR* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3150 150 Coils Coil 57 77 - -
Mtr1g3150 150 MobiDBLite consensus disorder prediction 1 52 - -
Mtr1g3150 150 CDD bZIP_plant_GBF1 28 78 IPR045314 GO:0003700|GO:0006355
Mtr1g3150 150 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 147 - -
Mtr1g3150 150 SMART brlzneu 23 87 IPR004827 GO:0003700|GO:0006355
Mtr1g3150 150 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 25 76 IPR004827 GO:0003700|GO:0006355
Mtr1g3150 150 Pfam bZIP transcription factor 27 84 IPR004827 GO:0003700|GO:0006355
Mtr1g3150 150 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 30 45 IPR004827 GO:0003700|GO:0006355
Mtr1g3150 150 Gene3D - 25 83 - -
Mtr1g3150 150 SUPERFAMILY Leucine zipper domain 27 81 IPR046347 GO:0003700|GO:0006355
Mtr1g3150 150 MobiDBLite consensus disorder prediction 21 52 - -
Mtr1g3150 150 MobiDBLite consensus disorder prediction 1 17 - -
Mtr1g3150 150 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3150 Mtr-Chr1 42759282 42760401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3150 25 138 bZIP Transcription Factor Family AT3G62420 45.614 1.42e-27 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr1g3150 bZIP_1 5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3150 K25786 - gmx:778189 147.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3150 1 42759282 42760401 Mtr1g3150 1 42759282 42760401 ECH
Mtr7g3481 7 51810440 51811409 Mtr1g3150 1 42759282 42760401 PCT