Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3146 ATGGTTTCCGATTCTCCTCACAATCTCCATCGAGAATTAGTTGAAGAGCCGCCAAATGATGATGTGGGAACCTTGTCCAACAAGATAAATCAGTTGAAAAAGCAAATCCAGGCCGAGAGAATTCAATCCATTAAGGAAAAACTTCAGAGGAACCAGAAGAAGCTGCAATGTCATACTTCAGGAATAATGTCAGCAGTATCAACCAGGGACTCTTCACAAACGGAGGAAAATACGACACGTTCAATTCTTTCCTCAAGAATGGACCGTCCTTTATGTAAATTCTATGGTTTTACCCAGGGTCCAGGAGACAGAAACCAGGGCAATCAAGACATGTCATCTGCTACAAGCATCAAGATTCCACGTATGGAAAGATTACCACCATATACATCTTGGATATTTTTGGACAGGAATCAGAGAATGGCTGACGATCAATCAGTCGTTGGAAGAAGACGGATCTATTATGATCAACGTGGAAGTGAGGCATTGATATGTAGTGACAGTGAGGAAGAATTAACAGAACCTGACGGAGAAAAACATGAATTTTGTGATGCTGAAGACCGTATTTTATGTATGGCATTTGAGGAACATGGGTTAAATGAGGAGGTTTTGAATGTTGTTAGCAAGTATGTTGGGGGCACCAGTTTAGAAATCCAGGAGAGGTACAAAAGCATCAGAGGAAGTAATATTGGTAGGTTGGACCAGCATCCTAAAAGCTCAGGAGAACATGAATTTCCTATGAGCATGTATCTAGAGAAAAACCTGAGTGATGCATTAGATTCTCTTGATAACCTTTTCTGTCGTCGGTGCCTGATTTTTGACTGTCGACTGCATGGCTGTTCTCAACCTTTGATATATCCCAGTGAAAAAAAGACAGTTTGGTCTGAGCCTGTAGGTGATAGAAAACCATGTGGTGATCAGTGCTACCTTCAGTTCAAGGTTGTTAAAAGTTTTTCAAAAGATTCAACTCCCGGGTCTTTTAGGGATAAGAAAACTACAATTGTAGAGGAGACAGATGGGATATTGTCACCATCCAGTGCAGAAGAACCTGGCAGTCAGAGTACTACACTTCCGACAAGAACTGATTGTCATGGATATATCAATTTAAATGACCCTGACTCGGAAAACTTGAGTAAACGGAAAGTCACAAATCAGTCTGACACGGCACAATGTGACTCAAGATCGCTTCCTGATTCTCAGGATTCTTGTAAAAAGCTGAAAAGAATCTCAGATGTAGTTACTGTAATTACTGATAATAGCCAGAGCTTACATTTGGATGGACCAAAAGCTGTCACAAATGTGACAGAACTTAAAAATTCGTTGAATTCAATGGAAGAACAAGTTGATGGAATTCTTGGTTTCTCAGATTGGAAACCTCTAGAGAAAGAGTTATACTTGAAGGGAGTGGAAATGTTTGGCAGAAACAGTTGCCTCATAGCTAGGAACTTACTTTCTGGTTCGAAGACTTGCATGGAAATATCTAGTTATATGCACGATGGAGGCATGTCAATGCCCCACAGGTCTATTATTTCAGCTGGTTCAATCATGGACGACAAAGGAAAATTTGACACAGAGTGCACGGACCAAGACATGCCATCTAGACCGAGGTTGCTGAGAAAAAGAGGCAAAACAAGGAAGTTCAAATATTCTTGGAAGTCTGCTGGTCACCCAACAATATGGAAAAGAATTGCTGATGGCAAAAACCAATCTTGCATGCAGTATACTCCATGTGGGTGTCAATCAATGTGTGGAAAGGATTGTTCTTGTCTTAATGGTGGAACATGCTGTGAAAAATATTGTGGTTGTTCAAAGAGCTGCAAGAACCGGTTCAGAGGTTGCCATTGTGCCAAGAGTCAATGTAGAAGTCGACAATGCCCATGTTTTGCTGCTGGACGTGAATGTGATCCAGATGTCTGTCGAAATTGTTGGGTTAGCTGTGGGGATGGTACACTGGGGGAGCCACATCGGCGTGGAGAAGGTCAATGCGGAAATATGAGACTTCTTTTAAGGCAACAACAGAGGATTATCTTAGGGAAATCTGATGTTTCTGGATGGGGAGCCTTCTTAAAGAATCCTGTTAACAAAAATGATTACCTAGGAGAGTACACAGGTGAACTGATCTCGCACAGAGAAGCCGATAAGCGTGGGAAAATATATGATCGCGCGAATTCATCTTTCCTTTTCGATTTGAATGAGCAGTATGTTCTTGATGCTTATCGTAAAGGAGACAAGTTGAAATTTGCAAACCACTCATCAAACCCCAACTGCTATGCAAAGGTTATGTTGGTTGCTGGAGATCATCGAGTTGGCATATTCGCCAAGGAACACATTGATGCCGGTGAGGAGCTCTTCTATGATTATTGCTATGGTCCAGATCAAGCACCTCCATGGGCTCGGAAACCTGAGGGTTCCAAGAGAGACGAATCAGCAGTTCCACAAGGTAGAGCAAAGAAACACCAATCCCATTGA 2466 0.4189 MVSDSPHNLHRELVEEPPNDDVGTLSNKINQLKKQIQAERIQSIKEKLQRNQKKLQCHTSGIMSAVSTRDSSQTEENTTRSILSSRMDRPLCKFYGFTQGPGDRNQGNQDMSSATSIKIPRMERLPPYTSWIFLDRNQRMADDQSVVGRRRIYYDQRGSEALICSDSEEELTEPDGEKHEFCDAEDRILCMAFEEHGLNEEVLNVVSKYVGGTSLEIQERYKSIRGSNIGRLDQHPKSSGEHEFPMSMYLEKNLSDALDSLDNLFCRRCLIFDCRLHGCSQPLIYPSEKKTVWSEPVGDRKPCGDQCYLQFKVVKSFSKDSTPGSFRDKKTTIVEETDGILSPSSAEEPGSQSTTLPTRTDCHGYINLNDPDSENLSKRKVTNQSDTAQCDSRSLPDSQDSCKKLKRISDVVTVITDNSQSLHLDGPKAVTNVTELKNSLNSMEEQVDGILGFSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGSKTCMEISSYMHDGGMSMPHRSIISAGSIMDDKGKFDTECTDQDMPSRPRLLRKRGKTRKFKYSWKSAGHPTIWKRIADGKNQSCMQYTPCGCQSMCGKDCSCLNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGTLGEPHRRGEGQCGNMRLLLRQQQRIILGKSDVSGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNEQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDAGEELFYDYCYGPDQAPPWARKPEGSKRDESAVPQGRAKKHQSH* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3146 821 Pfam CXC domain 611 642 IPR041355 -
Mtr1g3146 821 ProSiteProfiles CXC domain profile. 559 658 IPR026489 -
Mtr1g3146 821 Gene3D SET domain 573 788 IPR046341 -
Mtr1g3146 821 MobiDBLite consensus disorder prediction 344 362 - -
Mtr1g3146 821 ProSiteProfiles SET domain profile. 672 787 IPR001214 GO:0005515
Mtr1g3146 821 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 16 819 IPR045318 GO:0006338|GO:0018024
Mtr1g3146 821 Coils Coil 22 58 - -
Mtr1g3146 821 MobiDBLite consensus disorder prediction 319 397 - -
Mtr1g3146 821 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 16 819 - -
Mtr1g3146 821 Pfam SET domain 683 786 IPR001214 GO:0005515
Mtr1g3146 821 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 16 821 IPR025778 GO:0031519
Mtr1g3146 821 MobiDBLite consensus disorder prediction 1 24 - -
Mtr1g3146 821 SMART set_7 672 793 IPR001214 GO:0005515
Mtr1g3146 821 MobiDBLite consensus disorder prediction 798 814 - -
Mtr1g3146 821 MobiDBLite consensus disorder prediction 380 396 - -
Mtr1g3146 821 CDD SET_EZH 672 788 - -
Mtr1g3146 821 SUPERFAMILY SET domain 543 792 IPR046341 -
Mtr1g3146 821 SMART CXC_2 607 644 IPR033467 -
Mtr1g3146 821 MobiDBLite consensus disorder prediction 793 821 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3146 Mtr-Chr1 42728975 42738664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3146 661 790 C2H2 Transcription Factor Family AT2G23740 25.850 9.35e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr1g3146 SET 5.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3146 - - gmx:100795451 1284.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3146 1 42728975 42738664 Mtr1g3146 1 42728975 42738664 ECH
Mtr7g3486 7 51840004 51846483 Mtr1g3146 1 42728975 42738664 PCT