Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3145 ATGGAGCAAGAAAATCAAGCTATAATATCAATTCCAACTCTTAAGCAGGTGCAAAAGCCACCACCATCTTCATTAGCATCACTTGAGCTATTGAAAAATTATGGAAGCAAGTTCAATAAGCAAAAAAACAAAAGCAATGTTGAAACTTGTGCAAGTCCTCAAAAGTTGTCAACAGAAGATATAATAACACTTGCAGGAACGAAGTATATCCAGAACTCATCACAGTGGCATGATAATAATCTTTACATTCCTTATGGAACTGTTCTTGGAAGCTTGTTGTCGGAGGAAGAAAATAAACAAGTTGAACTAGCTCAGTTTGTTCTAGCAGCAGCTGAGAGAGTAGGTTGTCAACAATTTGAACGTGCAAACATGTTACTTTCACATTTTCATCTCATGAATGAAAGTGGAAATATTGGAAGCACAGTTCAGAGACTTCTTTTCCATTTCTCTCAAGCCCTTCAAGAGAGAATCAACAGAGAAACCGGACGAGGAAAGATGAAACTGCATAGATCAAATGAGAGAAACAAGGAGACGGAATTGATTGATAAAATGGAATTAGATACTAACATAGTAGTTAAATGTCATCAAAAAATTCCTTTCAATCAAGTAATGCAATTTGCTGGTGTACAAGCTATAGTGGAACATGTTGCATCACAAACAAAAATCCATTTGATTCATCTTAATATTGGATGTGGAGTGATGAGTACATGTTTCATGCAAGCATTAGTAGACCGCAAGGAAAAGCCGGTTGAAATTCTGAAGATCACAGCTATTGGATTTTCTAACAAGGCTAAGTTAGAAGAAATTGGCAAAAGTTTAATGAGTTTTGCTGAATCCTTGAACATACCCTTTTTATATAACATAGTTTTTGTTGAGGATGCTATGGAGATTAAGTTAGATCAATTTGACATTGAATATGATGAAGCTGTTGCTATTTACTCTCCATGTTCACTTAGGACTATGGTATCAAATTCTGATGGCTTGGAGAATTTGATGAAGGTGATAAGAAAAATGAAACCGTTTATTATGATAGTACTTGAACTTGAAGCAAACCATAATTCACCTTTGTTTGCGAATAGGTTTGTTGAAGCATTGTTCTTTTACTCAGCATTTTTTGACTGTGTTGATACTTGTATAAAAGAGGATTATGAGTGTAGAGTAATGATGGAAGCAATATTATCTGAAGGGATAAGAAACATTGTTGGTTTGGAAGATGAAGAAAGGAAGGTTAGGAATGTGAAGATTGATGTTTGGAGAAGGTTCTTTGCAAGGTATAGAATGGTGGAAACTGGATTCAGTGAGTCTTCAATTTATCAAGCTAATTTGGTTACTAAAAAGTTTGACTGTGGGAAGTTTTGTACTATAGACAAAAATGGGAAGTGTTTAATAATTGGATGGAAAGGGACTCCAATTCATTCAATCTCAGCTTGGAAGTTTCTTTGA 1443 0.3493 MEQENQAIISIPTLKQVQKPPPSSLASLELLKNYGSKFNKQKNKSNVETCASPQKLSTEDIITLAGTKYIQNSSQWHDNNLYIPYGTVLGSLLSEEENKQVELAQFVLAAAERVGCQQFERANMLLSHFHLMNESGNIGSTVQRLLFHFSQALQERINRETGRGKMKLHRSNERNKETELIDKMELDTNIVVKCHQKIPFNQVMQFAGVQAIVEHVASQTKIHLIHLNIGCGVMSTCFMQALVDRKEKPVEILKITAIGFSNKAKLEEIGKSLMSFAESLNIPFLYNIVFVEDAMEIKLDQFDIEYDEAVAIYSPCSLRTMVSNSDGLENLMKVIRKMKPFIMIVLELEANHNSPLFANRFVEALFFYSAFFDCVDTCIKEDYECRVMMEAILSEGIRNIVGLEDEERKVRNVKIDVWRRFFARYRMVETGFSESSIYQANLVTKKFDCGKFCTIDKNGKCLIIGWKGTPIHSISAWKFL* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3145 480 ProSiteProfiles GRAS family profile. 94 478 IPR005202 -
Mtr1g3145 480 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 17 478 IPR005202 -
Mtr1g3145 480 Pfam GRAS domain family 105 478 IPR005202 -
Mtr1g3145 480 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 17 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3145 Mtr-Chr1 42723098 42724540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3145 95 479 GRAS Transcription Factor Family AT1G66350 26.166 9.36e-44 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr1g3145 GRAS 1.6e-71 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3145 - - ccaj:109806982 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3145 1 42723098 42724540 Mtr1g3145 1 42723098 42724540 ECH