Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3140 ATGGTTGATGCAGGTGGGTTTGAAATGGGTCAATGCATATTGCTGAAAAGAGTGTTTGTGTTCTTATTTAGTACAGTGTTTATAGTTGAATGTGGTGCATATGATACAACACTAGAAGCTTCTCATTTATCTATTTCCCCTATGCATGCAATTCCTTCTGTTATGGCTCATCCACCATTGTCCCCTTATCTTTCCAATTGTTGTCAAAAAGACATGGTGTTGAAACGAGGTAGTGAAGGCTGCCATTGTGTTTTTCCTATAAAGTTAGACCTGCTACTTTTGAATGTCTCGGAAAACCCCGACTGGAATCTTTTTCTTGATGAATTGGCCGCACAATTGGAGATGCGTGCTACAGAAATTGAGCTGATAAACTTTTATGTGCACAGCTTATCGACTTGGAATATATCAATGTATATCACTCCGCGAAAAGAGATCAGTTTCTCTGCCAAGGAAGCATCTAAAATAAACTCCTCCCTTTTATTTCATAAGGTTCGACTAGACAGTAGATTCGTGGGTGATTACAGGGTTCTCAATTTGACCTGGTTTAAACCTCCAACTCCTTCTAAAGCTCCTACTTTTGCTGCATCAACTGTGAAAACTCCTGAGAGACGAGTACCTACAGCTACATCATCGAGTACTTCAGACAGGGGAAGGCATTCAAATTTGCTTGTTATCCTTGGAATTGTTACTGGGATACTCATCATGTCCATTATCTGTGTACTTATACTTTGTTTATGCACGCTGAGGCCAAAAACAAAAAGACCTACAGAAACTGAAAAGCCAAGGATAGAACATGTAGTTTCATCTGTTGCATCACATCGCCACCCAACCAGTACACGATTTATTTCTTATGAAGATCTTAGAGAAGCAACAAATAATTTTGAACCAGCAAGTGTACTTGGAGAAGGAGGTTTTGGTAGAGTTTTTAAAGGTGTTTTGAATGATGGAACTGCTGTTGCGATTAAGAGGCTTACTAATGGAGGGCAGCAGGGTGACAAAGAGCTTTTGGTTGAGGTTGAGATGCTTAGCCGGCTGCATCACCGTAACCTTGTAAAACTAGTTGGATACTATAGCAATCGTGACTCATCACAAAACCTACTTTGCTATGAGCTTGTCCCAAATGGAAGTTTGGAGGCCTGGCTTCACGGTCCCTTGGGAATAAATTGCTCTCTGGATTGGGACACCAGGATGAAGATTGCACTTGATGCTGCAAGAGGACTTGCTTACCTGCATGAAGATTCACAGCCATGTGTCATACACAGAGATTTCAAGGCATCTAATATATTGCTTGAGAACAACTTTCATGCTAAAGTTGCTGATTTTGGTCTAGCTAAACTAGCACCTGAAGGCAGAGTTAATTATCTGTCTACTCGAGTTATGGGCACATTTGGGTATGTAGCACCTGAGTATGCTATGACTGGACACCTACTCGTTAAAAGCGATGTTTATAGCTATGGGGTTGTCTTGTTAGAATTGTTGACCGGAAGGAAACCTGTGGAAATGTCACAGCCAACTGGACAAGAGAATCTTGTAACTTGGGCAAGGCCAATTCTTAGAGTTAAGGAGCAGTTAGAAGAACTTGCTGATCCAAGGCTTGGGGGAAGGTATCCAAAGGAAGATTTTTTCCGTGTTTGCACTATTGCTGCAGCCTGTGTTGCACCTGAAGCAAATCAACGACCTACAATGGGGGAAGTGGTACAGTCACTTAAAATGGTTCAGCGCATCACAGAAAATTATGATCCTGCATTACCGTCATCCAACACAAGGCCCAACCTGAGACAGTCCTCTGCCACTTATGACTCTGATGGGGCATCTTCAATGTTTTCTTCTGGTCCTTATTCTGGTCTAAGTGCCTTTGACTATGATAACATTTCTAGGACAGCTGTTTTCTCTGAAGATCTTCATGAAGGACGATGA 1917 0.4173 MVDAGGFEMGQCILLKRVFVFLFSTVFIVECGAYDTTLEASHLSISPMHAIPSVMAHPPLSPYLSNCCQKDMVLKRGSEGCHCVFPIKLDLLLLNVSENPDWNLFLDELAAQLEMRATEIELINFYVHSLSTWNISMYITPRKEISFSAKEASKINSSLLFHKVRLDSRFVGDYRVLNLTWFKPPTPSKAPTFAASTVKTPERRVPTATSSSTSDRGRHSNLLVILGIVTGILIMSIICVLILCLCTLRPKTKRPTETEKPRIEHVVSSVASHRHPTSTRFISYEDLREATNNFEPASVLGEGGFGRVFKGVLNDGTAVAIKRLTNGGQQGDKELLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCSLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKLAPEGRVNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVEMSQPTGQENLVTWARPILRVKEQLEELADPRLGGRYPKEDFFRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRITENYDPALPSSNTRPNLRQSSATYDSDGASSMFSSGPYSGLSAFDYDNISRTAVFSEDLHEGR* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3140 638 MobiDBLite consensus disorder prediction 580 604 - -
Mtr1g3140 638 MobiDBLite consensus disorder prediction 202 216 - -
Mtr1g3140 638 MobiDBLite consensus disorder prediction 192 216 - -
Mtr1g3140 638 CDD STKc_IRAK 300 570 - -
Mtr1g3140 638 PANTHER OS01G0750732 PROTEIN 46 638 - -
Mtr1g3140 638 Gene3D Transferase(Phosphotransferase) domain 1 372 584 - -
Mtr1g3140 638 Gene3D Phosphorylase Kinase; domain 1 256 371 - -
Mtr1g3140 638 SUPERFAMILY Protein kinase-like (PK-like) 269 571 IPR011009 -
Mtr1g3140 638 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 46 638 - -
Mtr1g3140 638 Pfam Protein kinase domain 297 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3140 638 ProSitePatterns Protein kinases ATP-binding region signature. 300 322 IPR017441 GO:0005524
Mtr1g3140 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Mtr1g3140 638 ProSiteProfiles Protein kinase domain profile. 294 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3140 Mtr-Chr1 42679459 42684393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3140 51 638 Receptor kinase-like Gene Family AT4G02010 71.791 0.0 876
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Mtr1g3140 Pkinase 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3140 - - gmx:100792818 998.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3140 1 42679459 42684393 Mtr1g3140 1 42679459 42684393 ECH
Mtr7g2979 7 46612141 46618968 Mtr1g3140 1 42679459 42684393 PCT
Mtr7g3493 7 51902966 51908633 Mtr1g3140 1 42679459 42684393 PCT