Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3119 ATGGTTAAAATGCATGCAATACTCTCTATAGCTACCTTGGTTATAGTTATTCTCTCAGTTTCAACAACATTGGCATCATCAACATCTTTGAAGTATGGTTTCTACAAGACAACATGTCCATCCGCGGAGGCAATTGTTAGAAGAGCTGTAAACAAAGCTGTTTCACTCAACCCCGGCATCACTGCTGGTTTGATTAGAATGCATTTTCATGATTGCTTTGTCAGAGGATGTGATGGTTCTGTTTTATTAGATTCCATACCAGGTATTCGATCTGAGAGAGACCATCCTGCAAACAATCCAAGTTTACGTGGCTTTGAAGTAATCAACGAAGCTAAGGCACAAATAGAGGCTGCATGTCCTAAAACGGTGTCCTGTGCAGACATTCTTGCTTTTGCAGCTCGAGACAGTGCTCGCAAAGTTAGTGGCGGCAGAATAGACTACTCAGTACCATCAGGACGCAGAGATGGTCGAGTGTCTATCTTCGACGAAGTCACACAAAATTTACCACCACCAACTTTCAGTGCGGAGCAACTTATCGATAATTTTGATAGAAAAGGTTTGTCAGTAGATGAAATGGTTACACTTTCTGGTGCTCATTCTATTGGTGTCTCACATTGTTCTTCATTCTCAAAACGATTATACTCTTTCAATGCAACTTTTCCTCAAGATCCTTCTATGGACCCTGACTTTGCTAGGTTGTTGAGATCCAAGTGTCCGCCACCACAGTCACAACAATCACAGTCACAGATACAGAACCTAGACTCAACAGTGGCGTTTGATGGTTCCACGCCTAATGATTTGGACAACATGTACTATAAGAGGTTGAAGAATAACCGTGGTTTATTAACTTCGGATCAAATATTGGTTAATAGTGGCTTAACTAAGAGAATGGTGTTAAAAAATGCCAGACATGCTGCAATCTGGAATGTGAAGTTTGCCAAGGCAATGGTACATATGGGTAACTTGGATGTGTTGACAGGTTCTCAAGGTGAGATTAGGGAGTACTGCAGCGTTGTTAATTTTATTTAA 1029 0.4101 MVKMHAILSIATLVIVILSVSTTLASSTSLKYGFYKTTCPSAEAIVRRAVNKAVSLNPGITAGLIRMHFHDCFVRGCDGSVLLDSIPGIRSERDHPANNPSLRGFEVINEAKAQIEAACPKTVSCADILAFAARDSARKVSGGRIDYSVPSGRRDGRVSIFDEVTQNLPPPTFSAEQLIDNFDRKGLSVDEMVTLSGAHSIGVSHCSSFSKRLYSFNATFPQDPSMDPDFARLLRSKCPPPQSQQSQSQIQNLDSTVAFDGSTPNDLDNMYYKRLKNNRGLLTSDQILVNSGLTKRMVLKNARHAAIWNVKFAKAMVHMGNLDVLTGSQGEIREYCSVVNFI* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3119 342 ProSiteProfiles Plant heme peroxidase family profile. 29 340 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g3119 342 PANTHER PEROXIDASE 25-RELATED 19 338 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3119 342 Gene3D - 33 340 - -
Mtr1g3119 342 SUPERFAMILY Heme-dependent peroxidases 30 340 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mtr1g3119 342 Pfam Peroxidase 46 302 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g3119 342 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g3119 342 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g3119 342 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g3119 342 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g3119 342 PRINTS Haem peroxidase superfamily signature 260 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g3119 342 Gene3D Peroxidase, domain 2 169 319 - -
Mtr1g3119 342 CDD secretory_peroxidase 30 339 IPR033905 GO:0004601|GO:0042744
Mtr1g3119 342 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Mtr1g3119 342 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Mtr1g3119 342 PANTHER PEROXIDASE 19 338 - -
Mtr1g3119 342 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3119 342 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3119 342 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3119 342 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3119 342 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3119 342 PRINTS Plant peroxidase signature 258 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3119 342 PRINTS Plant peroxidase signature 274 291 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3119 342 PRINTS Plant peroxidase signature 314 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3119 Mtr-Chr1 42486155 42487717 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3119 8 340 Peroxidase AT3G03670 40.541 2.47e-84 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3119 K00430 - rcu:8283103 438.728