Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3112 ATGGTTAGAATGCATTCAATACTCTCTATAGCTACCTTGGTTATAGTTATTCTCTCAGTTTCAACAACATTGGCATCATCGACATCTTTGAAGTATGGTTTCTACAAGACAACATGTTCATCCGTAGAGGCAATTGTTAGAAGAGCTGTAAACAAAGCTGTTTCACTCAACCCCGGCATCGCTGCTGGTTTGATTAGAATGCATTTTCATGATTGCTTTGTCAGAGGATGTGATGGTTCTGTTTTATTAGATTCCATACCAGGTATTCAATCTGAGAGAGACCATCCTGCAAACAATCCAAGTTTACGTGGCTTTGAAGTAATCAACGAAGCTAAGGCACAAATAGAGGCTGCATGTCCTAAAACGGTGTCCTGTGCAGACATTCTTGCTTTTGCAGCTCGAGACAGTGCTCGCAAAGTTAGTGGCGGCAGAATAGACTACTCAGTACCATCAGGACGCAGAGATGGTCGAGTGTCTATCTTCGACGAAGTCACACAAAATTTACCACCACCAACTTTCAGTGCGGAGCAACTTATCGATAATTTTGATAGAAAAGGTTTGTCAGTAGATGAAATGGTTACACTTTCTGGTGCTCATTCTATTGGTGTCTCACATTGTTCTTCATTCTCAAAACGATTATACTCTTTCAATTTAACTTTTCCTCAAGATCCTTCTATGGACCCTAACTTTGCTAGGTTGTTAAAATCTAAGTGTCCACCACCACAGTCACAGAGCATAAACCCAACTGTGGTGCTTGATGGTAGCACGCCTAATGATTTGGACAACATGTACTATAAGAGGTTGAAGAATAATCGTGGTTTATTAACTTCGGATCAAACATTGCTTAATAGTGGCTTAACTAGGAGAATGGTGTTAAAAAATGCTAGACATGCTGCAATCTGGAATGTGAAGTTTGCCAAAGCCATGGTGCATATGGGTTCCTTAGATGTGCTGACAGGTTCTGAAGGTGAGATTAGGGAGCGTTGTAGCGTTGTTAATTAA 1002 0.4062 MVRMHSILSIATLVIVILSVSTTLASSTSLKYGFYKTTCSSVEAIVRRAVNKAVSLNPGIAAGLIRMHFHDCFVRGCDGSVLLDSIPGIQSERDHPANNPSLRGFEVINEAKAQIEAACPKTVSCADILAFAARDSARKVSGGRIDYSVPSGRRDGRVSIFDEVTQNLPPPTFSAEQLIDNFDRKGLSVDEMVTLSGAHSIGVSHCSSFSKRLYSFNLTFPQDPSMDPNFARLLKSKCPPPQSQSINPTVVLDGSTPNDLDNMYYKRLKNNRGLLTSDQTLLNSGLTRRMVLKNARHAAIWNVKFAKAMVHMGSLDVLTGSEGEIRERCSVVN* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3112 333 ProSiteProfiles Plant heme peroxidase family profile. 29 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g3112 333 PANTHER PEROXIDASE 25-RELATED 19 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3112 333 SUPERFAMILY Heme-dependent peroxidases 30 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mtr1g3112 333 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Mtr1g3112 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Mtr1g3112 333 CDD secretory_peroxidase 30 332 IPR033905 GO:0004601|GO:0042744
Mtr1g3112 333 Gene3D - 33 333 - -
Mtr1g3112 333 Gene3D Peroxidase, domain 2 169 312 - -
Mtr1g3112 333 Pfam Peroxidase 46 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g3112 333 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g3112 333 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g3112 333 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g3112 333 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g3112 333 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g3112 333 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3112 333 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3112 333 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3112 333 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3112 333 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3112 333 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3112 333 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3112 333 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3112 333 PANTHER PEROXIDASE 19 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3112 Mtr-Chr1 42417575 42419376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3112 10 333 Peroxidase AT5G51890 43.827 2.76e-84 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3112 K00430 - rcu:8283103 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3112 1 42417575 42419376 Mtr1g3112 1 42417575 42419376 ECH