Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3085 ATGAAAATGAAGCTGCTGCTGATTTTGTTGACATTCTTAGTTTCTGGGTTTATCTCCTCTGGATCTGACACAACACTTTCTTTCTCTGAAAACGATGTCGTTTTGCAACCTCATATGGTAGACCTCACTCTCATTCAAGGAGCTGATTCCAAAGGAGCTGTCTGTTTGGATGGAACATTGCCCGGTTACCATCTGGATCGTGGATTTGAATCTGGCGCGAATAGTTGGCTTATTCATCTTGAGGGAGGAGGATGGTGTGATACTGTCAGAAATTGTGTCTACAGAAAAAAGACTCATCGTGGTTCCTCAAAATACATGGAAAATCAAATACCATTCACAGGAATATTGAGCAATAAACCTGAAGAAAACCCAGATTTCTTTAACTGGAATAGAGTCAAATTAAGGTACTGTGATGGAGCGTCTTTTGCTGGAGATAGTGAAAATGAGGCTGCAGGGCTTCAATTTCGAGGACAAAAAATATGGCTAGCTGCAATAGAGGAATTATTGTCTCAAGGAATGCAGAATGCTGAACAGGCCCTTCTCTCTGGATGCTCTGCGGGTGGTCTAGCATCCATAATACATTGTGATGAGTTCCAGAGCTTGTTACCAAAATCTTCAAAAGTGAAGTGTTTTAGCGATGCAGGATTTTTTCTCGATGCAATTGATATATCTGGAGGACGCACACTGAGGAATATGTTTGGAGGTGTAGTTCAGTTACAGGAAGTCCAGAAAAATCTGCCAAAAAGTTGTCTCAACAAAATGGACCCAACTTCGTGCTTCTTTCCTCAGAATGTGGTCGAACATGTCGAGACACCATTGTTTCTACTCAACGCGGCTTATGATGTGTGGCAGATCCGAGCCAGTTTAGCCCCATCAACAGCTGACCCCCTTGGCTCTTGGAATGACTGCAAATCGAACAATGCAAATTGTAACTCATCTCAAATTCAGCTCCTCCAAGACTTCAGAAATCAAATGCTTGACGACGTGAAAGACTTCTCAAGATCATCTCAAACTGGACTGTTTATAAATTCTTGTTTCGCTCATTGCCAGTCCGAGAGACAGGAGACATGGTTTGCAGATGACTCTCCTCTTATTGATGACAAGCCAATTGCAGTTGCTGTTGGAGACTGGTATTTCGATCGAGAAGTTGTCAAAGCTATTGACTGCCCTTACCCTTGCGACAATAGCTGCCATAATCTGGTGTTTAGAAGAGTATAA 1218 0.4236 MKMKLLLILLTFLVSGFISSGSDTTLSFSENDVVLQPHMVDLTLIQGADSKGAVCLDGTLPGYHLDRGFESGANSWLIHLEGGGWCDTVRNCVYRKKTHRGSSKYMENQIPFTGILSNKPEENPDFFNWNRVKLRYCDGASFAGDSENEAAGLQFRGQKIWLAAIEELLSQGMQNAEQALLSGCSAGGLASIIHCDEFQSLLPKSSKVKCFSDAGFFLDAIDISGGRTLRNMFGGVVQLQEVQKNLPKSCLNKMDPTSCFFPQNVVEHVETPLFLLNAAYDVWQIRASLAPSTADPLGSWNDCKSNNANCNSSQIQLLQDFRNQMLDDVKDFSRSSQTGLFINSCFAHCQSERQETWFADDSPLIDDKPIAVAVGDWYFDREVVKAIDCPYPCDNSCHNLVFRRV* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3085 405 Pfam Pectinacetylesterase 37 383 IPR004963 GO:0016787
Mtr1g3085 405 PANTHER PECTIN ACETYLESTERASE 2 403 - -
Mtr1g3085 405 PANTHER NOTUM-RELATED 2 403 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3085 Mtr-Chr1 42131177 42134870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3085 2 404 Carbohydrate Esterase AT1G57590 63.636 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3085 K19882 - gmx:100786972 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3085 1 42131177 42134870 Mtr1g3058 1 41844211 41848277 ECH
Mtr1g3085 1 42131177 42134870 Mtr7g3566 7 52681855 52685120 ECH
Mtr1g3085 1 42131177 42134870 Mtr1g3085 1 42131177 42134870 ECH
Mtr7g3548 7 52487422 52493011 Mtr1g3085 1 42131177 42134870 PCT