Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3080 ATGGGTAACGGCACTTCTCGTGTTGTTGGTTGTTTAGTGCCATTCAATGGTAAAAATGGTGTTGATTTGGAGTTTTTAGAGCCATTAGATGAAGGTTTAGGACATTCTTTTTGTTATGTGAGACCAACTATGTTTGAATCTCCTGCTATTAGTCCATCGAATTCCGAGAGGTTTACAGTTGATTCAAGTACTCTTGATTCTGAAACCTTGAGTGGTTCGTTTAGGCATGATAGTATGGAGCATTCTAGTTCTTCTGGTTTACATAAGCAGGGGAAGAATTTCCCTGAAACTACGTTTAAGACAATTTCGGGGGCTTCTGTTAGTGCTAATGTTTCAACAGCAAGGACCGGTGGTGGTAACCAGAGTGCTTTGTTTGCTGGTGATTTCTTGGAACCTGCTGCATCGTTTGAGGGAACTGCTTCGTTTGCTGCGATTCCTTTGCAGCCGGTTCCTCGTGGTTCTGGACCTTTGAATGGTTTTATGTCTGGTCCTTTGGAGAGAGGTTTTGCCTCGGGTCCATTGGATAGAAGTGGCGGTTTCATGTCTGGGCCGATAGAGAAGGGGGTTATGTCAGGTCCTCTCGACGACACTGACAAATCCAACTTTTCGGCACCGCTTGCGCGTGGTCGTAGGAGGCCGCGTCTACAACATCTCATGAGAAGTGTTAGTGGACCGGTGAAGAACACATTTTCTCGAACGTTCTCTAAGCACTCCATCGGTGGAAGTTGGATGCAAAGGTTGTTCTTTCAACCGGTTACTCAATTGGCATGGCCTTCCAGAGATACAAAGTGTAGGCCGGACATCTCTAGGAATTGTGGTATTGATGTTGGACCGTATGAAGCTGAGTATAAACACACGCATAATCTGCAGTGGGCTCAGGGAAAGGCTGGTGAAGATAGGGTTCATGTAGTTCTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGACGGTTTTAGTGGACCAGATGCACCTGATTTTTTGATGAGCCATCTTTATAGATTTCTAGACAAAGAATTGGAAGGTTTACTTTGGGATTATGAAGATAATCCTGTAGATTCCCTTAAACCTGAAGTCCCTGAAACTGTAAAAGCCGCCGTTGCTCCAGAATGCAGTCGGTCGGAAATGTCTGATACTCATACTAATTCTAATCAAGAATGTTTTGAAGCTTGTTCTGGTCCTGAATTAATCAAGGATCAATCATTTAACAATGAGATAGTTGAGGAAAAGGATGAAGTTAATGTAAATGTTGAACACCAGTTATCTAATTGTGGAAGTAACTTGTCTACTGTTTCTAATTCTGTTCAACATGAAAAGTTGACTGGAAAAGGTAAAAGAAGTTTAAGGCTTTATGAGCTACTTCAAATGGAATCTTGGGATGATCAATGTAATGATTCCTCAGTTCCGACGGAGTCAAAACTAGATGAGCATACAAGACCTTGCTCGTCTACTGTAAGAGAAGATGGCTCTAAACATCAGGATGAAGGCCCGTCTACATCAGGGGAAAATGGAAGCACTGGGTTTGGTTCAACCAACAAGGAGCATGAAGCTGTTTTTCCTGCTTCTGTATCAAGGCAGAATTCAAAAAAGTCATTTATCGGTGCAAAAATTAAAAAAATGTACAGGAAGCCAAAGTCCTTGTGTAAGAAACTCTTTCCTTGGAGTTATGATTGGCATAGGGAAGAAAGTAGTGTTGATGAAAAAATATTAGATGCCTCAGGACCTATTAGAAAATGCAGGTCTGGAGTAGATCATAATGCAGTTTTAACAGCAATGGCTCGAGCTCTTGAAAGAACAGAAGAGGCATACATGGAAACGGCGGAGAATAATCTGGACAAAAATCCAGAACTTGCTATAATGGGGTCATGTGTTCTAGTGATGTTGATGAAGGATCAAGATGTTTATGTCATGAATCTGGGAGATAGTCGTGTGATTCTGGCTCAAGAAAGATCAAACGATCGTCATCCTAATTCAAGCTCAGTCAAGGATGACATGAGGCATAGAAATAGATCTAGAGAGTCATTAGTACGCATGGAGCTTGATAGGATTTCAGAGGAGTCTCCAATTCACAACCATAACAATCATGTTATCAAGATGAATAAAAACCGTGAGATATCATTTTGCAAATTAAAAATGAGGGCTCTGCAGCTTTCTACAGACCACAGCACCAGTATTGAAGAGGAAGTTTCAAGAATAAGAGCAGAACACCCTGATGATAGTCAGGCCATATTGAATGATCGAGTGAAAGGACACTTAAAAGTTACCAGAGCATTTGGCGCCGGTTTCTTGAAGAGGCCATCTTTTAATGAAGCTCTACTCGAGGTGTTTCAAGTTAAATATATCGGCCATGCTCCTTACCTAAGTTGCACTCCTTCTATACTTCACCATCGACTTTCTTCAAGTGATCGATTCTTGGTACTCTCCTCTGATGGGCTTTACCAATATTTCAGCAATGAAGAAGTGGTTGCCCATGTCACATGGTTCATGGAAAATGTCCCAGAAGGCGATCCTGCTCAATACCTTATTGCAGAGCTTCTCTTCTGTGCTGCTAAAAAGAATGGAATGGACTTTCATGAACTGCTTGATATTCCTCATGGAGATCGGCGTAAATATCACGATGATGTATCTGTCATGGTCGTTTCTTTGGAGGGAAGGATTTGGAGATCATCGGGATAA 2679 0.4173 MGNGTSRVVGCLVPFNGKNGVDLEFLEPLDEGLGHSFCYVRPTMFESPAISPSNSERFTVDSSTLDSETLSGSFRHDSMEHSSSSGLHKQGKNFPETTFKTISGASVSANVSTARTGGGNQSALFAGDFLEPAASFEGTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRSGGFMSGPIEKGVMSGPLDDTDKSNFSAPLARGRRRPRLQHLMRSVSGPVKNTFSRTFSKHSIGGSWMQRLFFQPVTQLAWPSRDTKCRPDISRNCGIDVGPYEAEYKHTHNLQWAQGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRFLDKELEGLLWDYEDNPVDSLKPEVPETVKAAVAPECSRSEMSDTHTNSNQECFEACSGPELIKDQSFNNEIVEEKDEVNVNVEHQLSNCGSNLSTVSNSVQHEKLTGKGKRSLRLYELLQMESWDDQCNDSSVPTESKLDEHTRPCSSTVREDGSKHQDEGPSTSGENGSTGFGSTNKEHEAVFPASVSRQNSKKSFIGAKIKKMYRKPKSLCKKLFPWSYDWHREESSVDEKILDASGPIRKCRSGVDHNAVLTAMARALERTEEAYMETAENNLDKNPELAIMGSCVLVMLMKDQDVYVMNLGDSRVILAQERSNDRHPNSSSVKDDMRHRNRSRESLVRMELDRISEESPIHNHNNHVIKMNKNREISFCKLKMRALQLSTDHSTSIEEEVSRIRAEHPDDSQAILNDRVKGHLKVTRAFGAGFLKRPSFNEALLEVFQVKYIGHAPYLSCTPSILHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFCAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3080 892 PANTHER PROTEIN PHOSPHATASE 2C 11 892 IPR015655 GO:0004722|GO:0006470
Mtr1g3080 892 MobiDBLite consensus disorder prediction 462 513 - -
Mtr1g3080 892 SMART PP2C_4 282 881 IPR001932 -
Mtr1g3080 892 MobiDBLite consensus disorder prediction 497 513 - -
Mtr1g3080 892 PANTHER PROTEIN PHOSPHATASE 2C 32 11 892 - -
Mtr1g3080 892 MobiDBLite consensus disorder prediction 471 496 - -
Mtr1g3080 892 Pfam Protein phosphatase 2C 715 831 IPR001932 -
Mtr1g3080 892 Pfam Protein phosphatase 2C 601 653 IPR001932 -
Mtr1g3080 892 CDD PP2Cc 589 883 IPR001932 -
Mtr1g3080 892 ProSiteProfiles PPM-type phosphatase domain profile. 282 883 IPR001932 -
Mtr1g3080 892 MobiDBLite consensus disorder prediction 648 671 - -
Mtr1g3080 892 Gene3D - 274 445 IPR036457 -
Mtr1g3080 892 Gene3D - 455 889 IPR036457 -
Mtr1g3080 892 SUPERFAMILY PP2C-like 294 884 IPR036457 -
Mtr1g3080 892 MobiDBLite consensus disorder prediction 69 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3080 Mtr-Chr1 42069571 42076354 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3080 1 892 PP2C-type Phosphatase Gene Family AT2G46920 62.959 0.0 1080
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3080 - - cam:101510249 1576.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3080 1 42069571 42076354 Mtr1g3080 1 42069571 42076354 ECH