Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3058 ATGGTGAACCTTTTCTGGGTTTGCATTGTAATAGCACTTGTTTTCACCAACTGGGTTGATGCAAATGCATATTATCACATCAATGAAACTGAACTCTCTATCTTAGAAGCTCATGAAGCTTCTTCTTTTTCTTCACTTGTGGCTCAGCCTCACATGGTTGGAATAACCCTTATTCAATCTGCTGCTGCTAAAGGAGCTGTCTGCTTGGATGGAACATTGCCTGCTTATCATTTTGATCACGGATACGGATCCGGTGCAAACAGCTGGCTTGTTAATTTAGAGGGAGGTGGTTGGTGTAATAACCGTAGAACTTGCGTCTATCGCAAGACAACACGGCGTGGATCATCAAAATTCATGGAAAAAGCGATACCTTTTACTGGAATATTAAGCAATAATGCTCAAGAGAATCCAGATTTTTTTAACTGGAACAGAGTGAAAATTCGTTACTGTGATGGTGCCTCTTTTACCGGGGATAGTGAAGATAAGGCTGCGCAGTTGCAATTCAGAGGACAGCGCATTTGGTTGGCTGCAGTGGAGGATTTGATGTCAAAAGGAATGCGTTTTGCCAAGCAGGCTCTTCTTTCTGGATGCTCAGCTGGTGGTCTTGCTACTATTTTACACTGCGATGAATTTCGAGGTCATTTCCCAAGGACTACCAAAGTGAAGTGCCTCAGTGATGCTGGGTTATTTCTTAATGCTGTTGATGTAGCTGGTGGGCATACCCTCAGGAATTTTTTCAACGGTGTTGTCACCCTACAGGGAGCGCAGAAGAATCTTCCACGCGTTTGTACTAATCATCTTGATCCCACTTCGTGCTTCTTTCCTGAGAACTTGATTGCCAGTGTCAGAACCCCGCTATTCATTCTTAATACTGCCTATGACTCGTGGCAGATCCAGTCAAGCTTAGCTCCTTCATCGGCCGATCCCCACGGCAATTGGCGTGAATGCAGATTAAACCATAATAAATGTTCCGGTTCACAAATCCAATTTCTGCAAGGATTCAGGAATCACATGGTGAATGTTGTGAGAGGCTTCTCAAGATCAAGTCAAAATGGATTGTTCATAAATTCATGCTTTGCTCACTGCCAATCTGAGAGGCAAGACACATGGTTTGCTGACAACTCTCCTGTCATAGGAAACAAGGCAATTGCTCTGGCTGTTGGAGACTGGTATTTTGACCGAGCCGCAGTTAAGGACATTGATTGTCCTTACCCTTGTGATAACACATGCCACCATTTGGTTTTCAGATGA 1251 0.438 MVNLFWVCIVIALVFTNWVDANAYYHINETELSILEAHEASSFSSLVAQPHMVGITLIQSAAAKGAVCLDGTLPAYHFDHGYGSGANSWLVNLEGGGWCNNRRTCVYRKTTRRGSSKFMEKAIPFTGILSNNAQENPDFFNWNRVKIRYCDGASFTGDSEDKAAQLQFRGQRIWLAAVEDLMSKGMRFAKQALLSGCSAGGLATILHCDEFRGHFPRTTKVKCLSDAGLFLNAVDVAGGHTLRNFFNGVVTLQGAQKNLPRVCTNHLDPTSCFFPENLIASVRTPLFILNTAYDSWQIQSSLAPSSADPHGNWRECRLNHNKCSGSQIQFLQGFRNHMVNVVRGFSRSSQNGLFINSCFAHCQSERQDTWFADNSPVIGNKAIALAVGDWYFDRAAVKDIDCPYPCDNTCHHLVFR* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3058 416 PANTHER NOTUM-RELATED 4 415 IPR004963 GO:0016787
Mtr1g3058 416 Pfam Pectinacetylesterase 48 395 IPR004963 GO:0016787
Mtr1g3058 416 PANTHER PECTIN ACETYLESTERASE 4 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3058 Mtr-Chr1 41844211 41848277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3058 48 416 Carbohydrate Esterase AT1G57590 73.171 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3058 K19882 - gmx:100810716 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3058 1 41844211 41848277 Mtr7g3566 7 52681855 52685120 ECH
Mtr1g3085 1 42131177 42134870 Mtr1g3058 1 41844211 41848277 ECH
Mtr4g4542 4 59464601 59469497 Mtr1g3058 1 41844211 41848277 ECH
Mtr1g3058 1 41844211 41848277 Mtr1g3058 1 41844211 41848277 ECH
Mtr7g3566 7 52681855 52685120 Mtr1g3058 1 41844211 41848277 PCT