Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3029 ATGGCAACCAGATCCACAACCCGTGCTTCTTCCTCCGCCTCTGTCGCCTCCGCTAACACTACCAATCCACTTCAACAGCAGGTTGATAATTATAATGATGAAATCAAGAAAAAGGTGTTGGTGAAAGCCAATGAAACAGTAACCTTGGAGAAGGATGGTTTTCATTTTGTGGTAGGAGCATTGGTTGAGGTCTGTAGTGATGAAAAGGGTCTCAAAGGGGCTTGGTTTCTTGGCACCATCGTTGAATTAAAGCGACATTTTAGGTTTGTCGTCGAGTATGAGGCCCTGATCGATGATGATTCTAAGCCTTTGAGAGAGGAGTTGAATATCCGGCATATTAGGCCTCGTCCACCAAAGACTGATGATGTTGCTGAGTTCAAATTTTTCGACGAAGTTGATGCTTTTCACAATGATGGCTGGTGGGTTGGTATTGTTACAAAAGTTGTTGGGGACTCCAAGTATGTTGTGTTTTTCAGGAGCTTCAAGGAAGAGATGGAGTTTCATCATTCTCAGTTGAGGCTGCATCAGGATTGGATGGATCGCAGATGGGTCATGGCTTCTAAGGCTTTGAAGTTTTGA 579 0.4404 MATRSTTRASSSASVASANTTNPLQQQVDNYNDEIKKKVLVKANETVTLEKDGFHFVVGALVEVCSDEKGLKGAWFLGTIVELKRHFRFVVEYEALIDDDSKPLREELNIRHIRPRPPKTDDVAEFKFFDEVDAFHNDGWWVGIVTKVVGDSKYVVFFRSFKEEMEFHHSQLRLHQDWMDRRWVMASKALKF* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3029 192 Pfam Agenet domain 59 118 IPR008395 -
Mtr1g3029 192 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 55 190 - -
Mtr1g3029 192 Gene3D - 47 126 - -
Mtr1g3029 192 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 55 190 - -
Mtr1g3029 192 SMART agenet_At_2 124 180 IPR014002 -
Mtr1g3029 192 SMART agenet_At_2 54 121 IPR014002 -
Mtr1g3029 192 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3029 Mtr-Chr1 41471815 41475139 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3029 66 178 PHD Transcription Factor Family AT5G58610 31.852 8.72e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3029 - - mtr:MTR_1g084210 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3029 1 41471815 41475139 Mtr1g3029 1 41471815 41475139 ECH