Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3026 ATGGGCATTCAATCTTTTTATTTTGTAAAAATCAGAGTTGAAGTATTATACTACTCAGTTAATTATACACGACGACACCGCCTCACCCTCCTTAGCCGTAGAACTGAGCGATCCATAAACCCTGAACTCCAAAATCCACCGGAAACCATGTCCGACGACAAAACCACCGACCAATACGGCGTTCTCCTCTACTACAAGTACGTCGATATTCCAAACCTCAATGACCTCCTCACTTTCTACCGCTCCAACTGCTCTTCCCTCTCTCTCCTCGGCCGCGTTCGTCTCTCTTCCAACGGCGTCAATGTCACCGTTGGTGGCAATTTATCCTCTTTGGAACGGCACATTGAAGACCTCAAAGCCAATAGTAACTTATTTGATGGGACTGATTTCAAGCTTGCAACTTGTCATCAGCCATTAAACGACGATGTTGCGAAGGAGTGTGGATTCACTTCACTCTCGATTCGAATTGTTAAGGAACTGGTTACTTTGAGTTCTCATCCATTATTGAAGTCACCAGAAATATCAAATGCAGGAAGACATTTATCTGCACTTGAGTTCCATTCTACCATTCACAATGCTAATAAGGAGAGTCCAGAAAACAGCCTTGTTTTACTCGATGCAAGGAATTTGTATGAAACAAGAATTGGGAAATTTCATGCACCAAATGTTGAAACCTTGGATCCTCAAGTTCGGCAGTACAGCGATTTTTCGTCATGGATAGATGATAGGGGTGAGCAGTTGAAAGGCAAAAAAATTCTCATGTATTGTACTGGTGGAATCAGGTGTGAAATGGCATCAGCATATATAAGGTCAAAAGGTGCTGGGTTTGAGAATGTGTTTCAGTTATTTGGTGGTATACAACGGTATTTGGAGCAATTCCCAGATGGTGGTTATTTCAAAGGAAAGAATTTTGTTTTTGATCACCGGATATCAGTTGGAGGTTCAGACGCCAGTACAGTTGGTAGCTGTCTTATTTGTCAATGTTCCTTTGACGATTACTCTTCACGTTGTCGATGTACTTATTGCAGAATGCTTGTCTTGGTTTGTCATAGTTGTCAGAATGAATCTGCACTGTACGTTTGTGAGCTATGCCAAAAACAGGGCAAGGCTGTTGGGTCAAAGCAGTTAATTGAAAATGATGATTCAAAAAAATCACTGGAAGGTGACGAGTTCCCGAATTTTTCGTCAGATACTATGTTCTTGCCTCAAATGCTTAGGGGAGATGACGTAAGAACCACAAGAAAACTGAGAATCTTATGCTTGCACGGGTTTCGGCAGAATGCTTCCAGTTTTAAGGGAAGAACAGCATCGTTAGCCAAAAAACTCAAGAAAATTGCTGAATTTGTTTTTGTAGACGCACCTCATGAGGTGCCCTTCATTTATCAAACACCTGTGCCAGTGCACCATGTCAATGGTGCATCATTCTCTTTACCAGCTAGTCCTCCTCCACCTATGGAGAAATGCAAGAAGAAGTTCGCATGGTTTTTGGCACCCAATTTTGATGGAAGTAATGGTGTTGATTGGAAGTTAGCAGATGGTCCATTTGATCCACTTCAATACCAGCAGCAAACGGCTGGATATGACATTTCACTATCACACTTAGAGAATGTGTTCTCCCAAGAAGGGCCATTCGATGGAGTCTTGGGATTTTCACAGGGAGCAGCAATGACTGCTGTAATCTCTGCACAACAAGAGAAGCTAAAAGGTAAAATAGACTTCAAATTTGTAGTTTTATGTTCAGGCTTTGCTCTCCATATGAAGGAGATGGAGTGTAGCCCTATCAAGTGTCCTTCTCTTCATATTTTTGGTAATGAACATGGTCAGGACAGACAGATAGCCAACCAAGTAAGCAAGGAACTTGCCTCTCTATATGATGGCAGTTGTTCTGTCATTGTTGAACATGACTGTGGTCATATAATTCCTACTCGATCCCCATATATTGACGAGATCAAAGCTTTCCTTGGGCAATTTCTGCAAGAGCTCTAA 1986 0.4189 MGIQSFYFVKIRVEVLYYSVNYTRRHRLTLLSRRTERSINPELQNPPETMSDDKTTDQYGVLLYYKYVDIPNLNDLLTFYRSNCSSLSLLGRVRLSSNGVNVTVGGNLSSLERHIEDLKANSNLFDGTDFKLATCHQPLNDDVAKECGFTSLSIRIVKELVTLSSHPLLKSPEISNAGRHLSALEFHSTIHNANKESPENSLVLLDARNLYETRIGKFHAPNVETLDPQVRQYSDFSSWIDDRGEQLKGKKILMYCTGGIRCEMASAYIRSKGAGFENVFQLFGGIQRYLEQFPDGGYFKGKNFVFDHRISVGGSDASTVGSCLICQCSFDDYSSRCRCTYCRMLVLVCHSCQNESALYVCELCQKQGKAVGSKQLIENDDSKKSLEGDEFPNFSSDTMFLPQMLRGDDVRTTRKLRILCLHGFRQNASSFKGRTASLAKKLKKIAEFVFVDAPHEVPFIYQTPVPVHHVNGASFSLPASPPPPMEKCKKKFAWFLAPNFDGSNGVDWKLADGPFDPLQYQQQTAGYDISLSHLENVFSQEGPFDGVLGFSQGAAMTAVISAQQEKLKGKIDFKFVVLCSGFALHMKEMECSPIKCPSLHIFGNEHGQDRQIANQVSKELASLYDGSCSVIVEHDCGHIIPTRSPYIDEIKAFLGQFLQEL* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3026 661 Pfam Serine hydrolase (FSH1) 414 649 IPR005645 -
Mtr1g3026 661 SMART rhod_4 188 295 IPR001763 -
Mtr1g3026 661 Pfam UPF0176 acylphosphatase like domain 60 159 IPR040503 -
Mtr1g3026 661 Gene3D alpha/beta hydrolase 411 660 IPR029058 -
Mtr1g3026 661 Pfam Rhodanase C-terminal 300 365 IPR022111 -
Mtr1g3026 661 SUPERFAMILY alpha/beta-Hydrolases 414 659 IPR029058 -
Mtr1g3026 661 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 53 657 IPR020936 -
Mtr1g3026 661 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 53 657 - -
Mtr1g3026 661 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 168 312 IPR036873 -
Mtr1g3026 661 Gene3D - 48 161 - -
Mtr1g3026 661 Gene3D - 170 325 IPR036873 -
Mtr1g3026 661 ProSiteProfiles Rhodanese domain profile. 198 298 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3026 Mtr-Chr1 41446671 41451989 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3026 57 658 Sulfurtransferasese or Rhodanese AT1G09280 62.376 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3026 - - mtr:MTR_1g084180 1318.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3026 1 41446671 41451989 Mtr1g3026 1 41446671 41451989 ECH