Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3025 ATGGATTCATTCGAACCAAACTCAGATTCAACTCATTCAAACACATCACAAGAATCCAATCACAAAAAACGCCGCAAAATCGATAACCTCACCACCGATCAAAACTCAATCAATCTCATGCCATGGAGATCCCAATCAGACCAAAACACCTACTCCAAAAAACTCATCCAAGCACTCCTCCGTATAAATTCCCCGGAAACAACCAAACCTGCCGCCGGTCAAGTCCGCCAAACCGCCGATCGAGTCCTCGCCGCAACCGCCAAAGGAAGAACACGCTGGAGCCGCGCGATTCTCGGAAAATGGAAGAAACTCCGAAGACATCACAAAAAAGTCAAGAAAGCTTCCACCAACGGATTGAAGAGAGAGAGGATTCAACGATTACCGGCTGTGCAGAAGAAAACACGCGTTCTCGGTCAGTTAGTTCCCGGTTGCCGGAAAGTTCCGTTACCGAATCTTCTAGAAGAAGCTACTGATTATATTTCTGCTTTGGAGATGCAAGTGCGTGCTATGACAGCTCTTGCTGAGCTTCTCGCCGGTGGAACACCAGCGGGAATCGCCGGTCAGGTGTTGAGTTGA 576 0.4844 MDSFEPNSDSTHSNTSQESNHKKRRKIDNLTTDQNSINLMPWRSQSDQNTYSKKLIQALLRINSPETTKPAAGQVRQTADRVLAATAKGRTRWSRAILGKWKKLRRHHKKVKKASTNGLKRERIQRLPAVQKKTRVLGQLVPGCRKVPLPNLLEEATDYISALEMQVRAMTALAELLAGGTPAGIAGQVLS* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3025 191 MobiDBLite consensus disorder prediction 1 15 - -
Mtr1g3025 191 MobiDBLite consensus disorder prediction 1 32 - -
Mtr1g3025 191 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 14 190 IPR044660 GO:0006355
Mtr1g3025 191 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 126 179 IPR036638 GO:0046983
Mtr1g3025 191 CDD bHLH_AtIBH1_like 119 174 IPR044549 GO:0006355
Mtr1g3025 191 MobiDBLite consensus disorder prediction 16 30 - -
Mtr1g3025 191 PANTHER TRANSCRIPTION FACTOR BHLH150 14 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3025 Mtr-Chr1 41424188 41425078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3025 1 170 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 41.146 1.80e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3025 - - gmx:100783462 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3025 1 41424188 41425078 Mtr1g3025 1 41424188 41425078 ECH