Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3017 ATGAGTGTTGAGTTGTGGCCTGTCTTCTGTTCTGTGTGCGTGTGTCTAAGTAACGTGCTTTCTTTGATCATTCTCGAGGAACAACCTCATAGTGTCGACATGGTTGGCAAGGAAGATCTATTGATCGAAGAAGTATGCAAACTCTATGATCAAATCTCAAGCTTAGACACACTCAAACCTTGCAAAAATGTCAACACACTTTTCACAAAACTTGTTCTCACATGCATGCCACCTAGTCCCATTGATGTTACCAAACTTAGCACAAAAGTTCAAGAAATTAGATCCAAACTCATAAGGCTATGTGGTGAAGCTGAAGGCCATTTAGAAAGTCACTACTCAACTATCATAGCTTCATACAATAATCCACTCAATCAACTCAACATTTTCCCTTATTATTCAAACTACCTCAAACTTAGTCTCCTTGAATTCAATATCTTAACCAAACACTCCACTAATGTTCCTAAAAAAATTGCCTTTATTGGCTCAGGTCCACTTCCACTTACTTCACTTGTGTTAGCCACTAATCACCTACAAAACACAATTTTTCACAACTATGACTTTGACCCTTTAGCCAATTCCAAAGCTTCTTGCTTGGTTTCCTCTGATCCTGAATTATCAAAGCGTATGTTTTTTTACACCAATGATATATTGGATGTTTCAAATGCTTTGAAAGAATATGAAGTTGTTTATTTGGCAGCACTTGTGGGAATGAGTGTTGAGGAAAAGAATAGGATCATTGAGCATTTGGCTAAGTACATGGCACCAGGAGCACTCCTGATGCTCAGGAGTGCTCACGGTGCGCGTGCTTTTTTGTATCCGGTTGTTGATACCAATGATCTTCGAGGCTTTGAGGTGCTCTCGGTGTTTCATCCAACGGACGAGGTTATCAATTCAGTTGTCATAGCGCGCAGGTATCCTATGGTTTTACTACCAAACAAGTGTTGTTCTGATGAGATTCAAGCTCTCAAACCACTTATCAACCATGGCAATAATATGATTGAGGAATTGGTCATTGAAGAAAATTAA 1026 0.3918 MSVELWPVFCSVCVCLSNVLSLIILEEQPHSVDMVGKEDLLIEEVCKLYDQISSLDTLKPCKNVNTLFTKLVLTCMPPSPIDVTKLSTKVQEIRSKLIRLCGEAEGHLESHYSTIIASYNNPLNQLNIFPYYSNYLKLSLLEFNILTKHSTNVPKKIAFIGSGPLPLTSLVLATNHLQNTIFHNYDFDPLANSKASCLVSSDPELSKRMFFYTNDILDVSNALKEYEVVYLAALVGMSVEEKNRIIEHLAKYMAPGALLMLRSAHGARAFLYPVVDTNDLRGFEVLSVFHPTDEVINSVVIARRYPMVLLPNKCCSDEIQALKPLINHGNNMIEELVIEEN* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3017 341 Pfam Nicotianamine synthase protein 38 306 IPR004298 GO:0030410|GO:0030418
Mtr1g3017 341 PANTHER SYNTHASE, PUTATIVE-RELATED 35 340 - -
Mtr1g3017 341 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 33 309 IPR004298 GO:0030410|GO:0030418
Mtr1g3017 341 Gene3D Vaccinia Virus protein VP39 40 306 IPR029063 -
Mtr1g3017 341 PANTHER NICOTIANAMINE SYNTHASE 3 35 340 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3017 Mtr-Chr1 41340832 41342093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3017 34 314 Nicotianamine Synthase Gene Family AT1G09240 61.592 2.89e-128 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3017 K05953 - gmx:100803630 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3017 1 41340832 41342093 Mtr1g3017 1 41340832 41342093 ECH