Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3003 ATGATAATGGAGAAAAGAAGTGGTAGCTTCCTTAGCTTCTTTGATCGGAATGGAAAATCTCCAAAGAAACTCCTTTATGTTTCAAACCACGCAAAGGAAAACATTGAAATCATGCCAATGTCACAGATAAAGATGGATGAGAATGGAGAAAATCCTAGTAATATTGCAAGTACTGATTTTAACTTTGCCTTATTATCAATTAGTAGTGATGATGATGAAGGGTGTGATAAACCCCCAGGGCTAGTAGCCAGACTCATGGGTTTGGATTCATTGTCTCAGTGCTCCTCCACTTCATTATGTTGTCACTTAGATTCTTTAAACATGGCACTTAAGTCAAACAAGTCTTCTTGTGATACCATTGAACCAAAGGCTCATAAAGTGGGAAATACAACAATGAAAAGATTTCAAAATGAAACTTTGTTTTCAAAGTCTGCTAAACCCATTTCAGTTACTCACAACAAACATTTGTCTCCTATAAAAAGTCACGTTAATATGAAACCTAAGAATACAGCATATATAATGGGAGCATCTGCTAAGAGAATTGTGGCAAGTCCCGAACTATATATGAGGAGCACAATGTCTTCAATTGGACATTTATCTGTTCCTCTGCGAACTCTTGATCTGCAAGAGAAATTGGAAATAGCGCAACTCGGATCCAAGATGAGGAGCAACTTATATAAGTCTACTTCAATCTTCAAAGGTTCAAGAGATTCAGAAAATAATAGGTCTTGCCTTGGTAAAGGAAAATTTGCTTCACTTGCAACACCATCCAAAACCCTTGTTCAAAGTAGGGATACATTGAATTTGAATGGAAATAGGAGATACTTGAAGAAGAAAGAGATAAAATCAAACCATAAAAATTGGAATGGTCAGAACAGCACCGTTCTTAGGCAAACCAGCAAAGGTAAATCATCTTCAAAAGTTGACACCAATAAGTCAACACAAACCTGTTCTTCAGAAAGTTCGACCGGAGCTAGGACGACGACAAACAAATGTGCTGTAAATTCTTACTATGAATCCAAAAAGTCCAGAACAAGAGTAACTGATAAGCAAAAGGAGCTTTCAGTATCCAAAAGAAAGAGTTCTTCCGAAAAGAAGAGGTGTGATCAGAATGATGCACGAGGTTCTGATAATGTAGTTAATACTCATGATAGAAAGTCTATAAAATGTAATGTTACAATGGATGAAAGTATTTACAATGATGCATATAGCATGACAGAAAGCAGGGATGTCATTTCATTTACATTTAAATCTCCATTGAGGAAAAATGCATCTCAGTCGCAGTCGACTACTAAGCAAGTGATGGAAACAAGGACCAGAATTGATGTCGATTCTTTTCTTCATGTTGATAAGGTTTATCCTACCAGGTTACATGTAATGGATGTTGATACATTAAGTGTCATGTTATCTCACATTAACCCACCTCAATGTACCTTGGAAATAGAAAGGTGTTCTGATGATTTTGAATCTATTTCGGAAGATAGATTTAACAACATGGCATGCAACACATCAAGGGAACATGACAATTTCTTTCACCTGAACCTGCTTAGTGATAAACTGGACAGCATGGATGACAATTGCTGTTCTTCAAATTATTATACAATTCCTGGCATGAATCAGCAACTTCAGATATCAGAACCAATGGAAGATCTGAGCCGTAACAGCAATGAAAGCAGAGACGATTTATGTTATCAGCATACAAGAACTGTTGCTACTTTTGAAAATCCTTTCATCAGCAAAAGTAACTTGGATAGTGAAGATAGCACATATGGAGGCAACAGAGTTTATTCTTCCATGCAAGATGAAAAAGTATATAGTTCTCAAATAAATGAATCTATATCACCTGAATACAAGATGAATTGGTCAGAGAAAAGCTCTACAAGATCGTCAAGGATGATGGAACTTGAATATGTAAAGGATATACTCCGCAATGTAGAATTGATAGCAGAAGAGTTAGTGGTGGGTGAGACAGACAATATAATGATGCTAACTCTCTTTGATCTGTTGGAGAATCAAAGAACTGGTGTGGAAAGCTATGAAGAATACTCTAAGCTCAAAAGGAAAGCTATATTTGACTGTGTAAGTGAATGCATAGAATTAAGATGTAGGCAAGTTTTTGTTACAAGGTGCAAAGCATGGCCTAGATGCATGGTGGCATCAGTGAAGAGGAAAGGTTGGTTAGCAGAAGTGTACAAGGAGATGGTGGAATTTAGAAGCATGGAAGAAGAGGTGATGGTGGATGAGCTTGTTAGCAAGGACATGAGCACTCCATTGGGTAGATGGCTTGACTTTGACATTGAAGCCTTTGAAAATGGCTTAGAACTTGAGCTTGACATAGTTACCTATTTGATAGATGAATTGGTTTCTGATTTGTGGCTTGTTTAA 2385 0.3694 MIMEKRSGSFLSFFDRNGKSPKKLLYVSNHAKENIEIMPMSQIKMDENGENPSNIASTDFNFALLSISSDDDEGCDKPPGLVARLMGLDSLSQCSSTSLCCHLDSLNMALKSNKSSCDTIEPKAHKVGNTTMKRFQNETLFSKSAKPISVTHNKHLSPIKSHVNMKPKNTAYIMGASAKRIVASPELYMRSTMSSIGHLSVPLRTLDLQEKLEIAQLGSKMRSNLYKSTSIFKGSRDSENNRSCLGKGKFASLATPSKTLVQSRDTLNLNGNRRYLKKKEIKSNHKNWNGQNSTVLRQTSKGKSSSKVDTNKSTQTCSSESSTGARTTTNKCAVNSYYESKKSRTRVTDKQKELSVSKRKSSSEKKRCDQNDARGSDNVVNTHDRKSIKCNVTMDESIYNDAYSMTESRDVISFTFKSPLRKNASQSQSTTKQVMETRTRIDVDSFLHVDKVYPTRLHVMDVDTLSVMLSHINPPQCTLEIERCSDDFESISEDRFNNMACNTSREHDNFFHLNLLSDKLDSMDDNCCSSNYYTIPGMNQQLQISEPMEDLSRNSNESRDDLCYQHTRTVATFENPFISKSNLDSEDSTYGGNRVYSSMQDEKVYSSQINESISPEYKMNWSEKSSTRSSRMMELEYVKDILRNVELIAEELVVGETDNIMMLTLFDLLENQRTGVESYEEYSKLKRKAIFDCVSECIELRCRQVFVTRCKAWPRCMVASVKRKGWLAEVYKEMVEFRSMEEEVMVDELVSKDMSTPLGRWLDFDIEAFENGLELELDIVTYLIDELVSDLWLV* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3003 794 MobiDBLite consensus disorder prediction 279 326 - -
Mtr1g3003 794 Pfam Domain of unknown function (DUF4378) 634 786 IPR025486 -
Mtr1g3003 794 Pfam DUF761-associated sequence motif 71 91 IPR032795 -
Mtr1g3003 794 MobiDBLite consensus disorder prediction 286 326 - -
Mtr1g3003 794 MobiDBLite consensus disorder prediction 339 380 - -
Mtr1g3003 794 MobiDBLite consensus disorder prediction 342 380 - -
Mtr1g3003 794 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 4 792 - -
Mtr1g3003 794 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 4 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3003 Mtr-Chr1 41193483 41197426 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3003 8 791 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 28.960 9.71e-66 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3003 - - mtr:MTR_1g083850 1482.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3003 1 41193483 41197426 Mtr1g3003 1 41193483 41197426 ECH