Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2997 ATGAGTAAGGCTGAATTATCAAGGATGAAGCAACCACTTGTTCCGTTGGCAACCTTGATCGGCCGTGAGCTACGAAATGGAAAAACGGAGAAGCCTTTTGTGAAGTATGGACAGGCTGGTTTGGCAAAAAAAGGAGAAGATTACTTTCTAATCAAGACAGATTGCCATAGAGTTCCTGGCGATTCTTCAACGTCATTCTCTGTCTTCGCGATCCTTGACGGGCATAATGGTATATCCGCTGCTATTTTTGCGAAAGAAAATATAATAAACAATGTCATGAGTGCCATACCGCAAGGTGTAAGCAGGGAGGAATGGCTTCAAGCTCTGCCTCGGGCTCTAGTTGTCGCTTTTGTGAAAACTGACATGGAATTTCAGAAAAAAGGGGAAACTTCTGGAACGACAGCTACGTTTGTGATTATTGATGGATGGACTGTAACAGTTGCATCTGTTGGGGATTCCCGATGCATATTAGATACTCAGGGAGGCGTTGTTTCTCTCTTGACAGTTGATCACAGATTGGAAGAAAATGTAGAAGAGAGGGAGCGGGTTACAGCCAGTGGTGGTGAAGTAGGAAGACTCAATGTATTCGGAGGCAATGAGGTGGGGCCTCTTCGCTGTTGGCCTGGTGGATTGTGCCTTTCTAGATCGATTGGTGACACTGATGTGGGAGAGTATATCGTTCCAATACCACACGTTAAGCAAGTGAAGCTTTCAAATGCTGGCGGAAGACTAATTATAGCTTCTGATGGAATTTGGGATACTTTGTCTTCTGATATGGCTGCCAAGTCATGTCGTGGTGTACCTGCAGAACTTGCTGCCAAGCTGGTGGTTAAGGAAGCTCTAAGGTCAAGAGGGCTGAAGGATGATACAACCTGCCTTGTTGTAGATATTATTCCTTCGGACTATCCTGTGTTGCCGATGCCAGCAACTCCTAGAAAGAAACATAATGTGCTTAGTTCACTTCTCTTTGGAAAGAAATCCCAAAACTTGGCAAACAAAGGAACTAATAAGCTTTCTGCAGTTGGCGTTGTGGAGGAGTTATTTGAAGAGGGTTCTGCAATGCTTACAGAGAGGCTAGGTAATAATGTTCCTTCCGACACAAATTCTGGTATTCACCGCTGTGCAGTTTGCCTAGCAGATCAACCCTCTGGTGATGGCTTATCAGTGAACAACGATCATTTTATCACTCCGGTATCTAAGCCATGGGAAGGTCCATTCCTCTGCACAAACTGTCAGAAGAAGAAAGACGCCATGGAAGGAAAAAGGTCCTGA 1272 0.4481 MSKAELSRMKQPLVPLATLIGRELRNGKTEKPFVKYGQAGLAKKGEDYFLIKTDCHRVPGDSSTSFSVFAILDGHNGISAAIFAKENIINNVMSAIPQGVSREEWLQALPRALVVAFVKTDMEFQKKGETSGTTATFVIIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENVEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDTLSSDMAAKSCRGVPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDYPVLPMPATPRKKHNVLSSLLFGKKSQNLANKGTNKLSAVGVVEELFEEGSAMLTERLGNNVPSDTNSGIHRCAVCLADQPSGDGLSVNNDHFITPVSKPWEGPFLCTNCQKKKDAMEGKRS* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2997 423 Gene3D - 33 301 IPR036457 -
Mtr1g2997 423 PANTHER ALPHABET, ISOFORM E-RELATED 2 423 - -
Mtr1g2997 423 CDD PP2Cc 43 297 IPR001932 -
Mtr1g2997 423 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 2 423 - -
Mtr1g2997 423 Pfam Protein phosphatase 2C 61 281 IPR001932 -
Mtr1g2997 423 SMART PP2C_4 23 295 IPR001932 -
Mtr1g2997 423 ProSiteProfiles PPM-type phosphatase domain profile. 25 297 IPR001932 -
Mtr1g2997 423 SMART PP2C_SIG_2 50 297 IPR001932 -
Mtr1g2997 423 SUPERFAMILY PP2C-like 38 297 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2997 Mtr-Chr1 41133551 41136950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2997 1 422 PP2C-type Phosphatase Gene Family AT1G09160 75.118 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2997 - - gmx:100794630 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2997 1 41133551 41136950 Mtr1g2997 1 41133551 41136950 ECH