Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2993 ATGGGTCATTTTTCATCCATGTTCAATGGATTGGCACAGTCATTGAAAATGAAAAAAGGAAGGAGTAAATGTAGTGGGAGAGAAGCTGCTGAAGCATTGGCAAAAGAAGCAAAAAGAAATCACTCCCTTATCAATAGCTCTGGCACCATTAATGTTGATGGTTCAAACAACTTTGCCTCGGTTTTCTCCAAAAGAGGCAAGAAAGGAGTTAACCAAGATTGTTGCATAGTGTGGGAAGAATTTGGATGCCAAGAGGACATGATCTTCTGTGGGATTTTTGATGGACATGGACCTTGGGGTCACTATGTGTCAAGAACAGTAAGAGAGTCAATGCCATCAGCTTTGCTATGCAACTGGCAGGAGACACTTTCTCAAACTTCAATTGATCCAGAAATTGATTTAAAGACAGGCAAAAAACATCAACAGTTTAATATATGGAAGCATTCTTACCTGAAGACATGTGCTTCAATCGATCAAGAACTAGAGCAGAATCACAAGATTGATTCGTTTTTCAGTGGAACGACGGCAGTGTCAATTGTTAGACAGGGTGAACTCATTGTGATTGCAAATGTTGGTGATTCTCGTGCTGTTTTAGCTACAACATCAGATGATGGAAATTTGGTTCCAGTTCAGCTAACAATAGATTTCAAGCCCAATTTACCTCAGGAAGCAGAGAGAATACTTGACTGCCAAGGGCGAGTCTTCTGCCTAGACGACGAGCCTGGGGTGCACCGTGTGTGGTTGCCGAATGAGGAGTCTCCGGGACTAGCCATGTCAAGGGCTTTTGGTGACTATTCTATGAAAGATTATGGTCTTATTTCAGTGCCTGAAGTAACACAAAGGAATATAACAAGCAAAGACCAGTTTGTTGTGCTAGCCAGTGATGGGGTTTGGGATGTGATCTCTAATCAAGAAGCAGTGGATATTGTGTCTTCAACAGAAGACAGAACAAGTTCATCTAAACGTTTGGTGGAGTGTGCAATGCATGCATGGAAATGCAAGAGGCAAGGTATTGCTATGGATGATATTTCAGCCATATGTCTATTCTTTCATTCCTAG 1059 0.4164 MGHFSSMFNGLAQSLKMKKGRSKCSGREAAEALAKEAKRNHSLINSSGTINVDGSNNFASVFSKRGKKGVNQDCCIVWEEFGCQEDMIFCGIFDGHGPWGHYVSRTVRESMPSALLCNWQETLSQTSIDPEIDLKTGKKHQQFNIWKHSYLKTCASIDQELEQNHKIDSFFSGTTAVSIVRQGELIVIANVGDSRAVLATTSDDGNLVPVQLTIDFKPNLPQEAERILDCQGRVFCLDDEPGVHRVWLPNEESPGLAMSRAFGDYSMKDYGLISVPEVTQRNITSKDQFVVLASDGVWDVISNQEAVDIVSSTEDRTSSSKRLVECAMHAWKCKRQGIAMDDISAICLFFHS* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2993 352 CDD PP2Cc 57 350 IPR001932 -
Mtr1g2993 352 PANTHER ALPHABET, ISOFORM E-RELATED 1 352 - -
Mtr1g2993 352 SMART PP2C_4 49 348 IPR001932 -
Mtr1g2993 352 SUPERFAMILY PP2C-like 57 351 IPR036457 -
Mtr1g2993 352 ProSiteProfiles PPM-type phosphatase domain profile. 58 350 IPR001932 -
Mtr1g2993 352 Pfam Protein phosphatase 2C 82 321 IPR001932 -
Mtr1g2993 352 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 352 - -
Mtr1g2993 352 Gene3D - 54 351 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2993 Mtr-Chr1 41096660 41100387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2993 1 351 PP2C-type Phosphatase Gene Family AT3G05640 69.382 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2993 - - gmx:100793051 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3629 7 53288917 53292803 Mtr1g2993 1 41096660 41100387 PCT