Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2985 ATGGCTGGAGGAGATGCACAAAAAGGAAGAAGAATCGCCATAATTGGCGTATCTACCTTGTTATTGGTGGCTATGGTTGTTGCTGTAACGATTAGCATAAACCAAAACCAAAATGATGTTAAGGACGATTTTAAGGATGATTTAGCAGACAACAAAAAGAATCATGTTGCTTCTACATTGAAAGCGGTGCAAACTATTTGTCATCCCACCACTTACAAGAAGGAATGTGTTGAATCCCTCGTAGTGGAGGCTGAGGCTGGCAATGTCACCGACCCAAAAGAACTCATTAAAATCGCATTCAATGTTACCATCAATAAAATTGGTGAAAAACTCAAGGAAACTGAAATGTTTAGCGAGATCGAGAAGGATCCTAGATCCAAGGATGCACTTGATACTTGCAAGCAGCTTATGCATCTTTCAATTGGTGAATTCACAAGGTCACTTGATGGAATAAGCGAGTTTGATCTAAAACATATGAACCAAATTCTCATGAATTTGAAGGTTTGGCTCAATGGTGCTGTCACATACATGGATACATGCTTAGATGGATTTGAAAACACTACTGGTGACGCTAGTAAAAAAATGAAACACTTATTAACATCAAGCATACACATGAGTAGCAATGTCCTGGCTATTGTTTCAAATTTCGCTGACACAGTCTCTGATATGAATGTATCCAAACTTTTTGGACGTCGTCTCCTTCAAGATTCTGAGATTCCTTCTTGGGTTGAACATCGCATACTCCTTGATGCAATGACAAACAAATCAAAACCAAAGCCTAATGTTACCGTAGCTTTAGATGGTAGTGGTGATTTTAAGAGCATAAATGAGGCATTGAAAAAGGTTCCTGGTGAGGAGGATGAAACACCATTTGTGATCTACATTAAGGCAGGTGTTTACCGAGAGTATGTTGAAGTTTTAAAAAATATGACACATATTGTGTTTGTTGGTGATGGTGGTAAGAAGTCGATAATCACTGGCAACAAAAACTATATGGATGGAGTTACCACCTACCATACCACCACTGTTGCTATTCAAGGAGATCACTTTACCGCCATTAACATGGGTTTTGAGAATTCAGCTGGTCCACAAAAACATCAAGCAGTGGCACTAAGAGTTCAAGGAGATAAGACTATCTTCTTCAATTGCTCAATGGATGGATATCAAGACACACTTTATGTACACGCCATGCGTCAATTTTACCGTGACTGTACTATTTCAGGTACCATCGACTTTGTCTTTGGTAATGCAGAATCGGTATTCCAAAACTGCAAATTCGTGGTCCGAAAGCCTATGTCAAACCAACAATGCATTGTGACCGCACAAGGAAGAAAAGAAATAACTGGACCATCAGCAATAGTCATCCAAGGAGGCTCTATTGTTGCTGACCCTGAGTTCTATCCAGTCAGGTTTGACCACAAGTCCTACCTAGCCCGTCCATGGAAGAATTTCTCTAGGACTATCATCATGGATACATTCATCGATGATTTGATTCATCCCGATGGTTTTTTTCCATGGCATACAGAAGTGGGGCCTATTAACATGGACACTTGCTTCTATGCTGAATACCATAACTATGGCCCTGGTTCAAACAAATCAAAGCGTGTGAAATGGGCTGGAATCTATAACATCAATTCAAAGGCTGCACATAGGTTTGCACCATCCAAGTTCTTCCATGGTGGTGACTGGATTAAGGACACTGGAATTCCTTACTTTCCAACTATACCTGAACACAAGAAGCACAAAAAGACAGTGCTTAAATGGTGA 1767 0.4007 MAGGDAQKGRRIAIIGVSTLLLVAMVVAVTISINQNQNDVKDDFKDDLADNKKNHVASTLKAVQTICHPTTYKKECVESLVVEAEAGNVTDPKELIKIAFNVTINKIGEKLKETEMFSEIEKDPRSKDALDTCKQLMHLSIGEFTRSLDGISEFDLKHMNQILMNLKVWLNGAVTYMDTCLDGFENTTGDASKKMKHLLTSSIHMSSNVLAIVSNFADTVSDMNVSKLFGRRLLQDSEIPSWVEHRILLDAMTNKSKPKPNVTVALDGSGDFKSINEALKKVPGEEDETPFVIYIKAGVYREYVEVLKNMTHIVFVGDGGKKSIITGNKNYMDGVTTYHTTTVAIQGDHFTAINMGFENSAGPQKHQAVALRVQGDKTIFFNCSMDGYQDTLYVHAMRQFYRDCTISGTIDFVFGNAESVFQNCKFVVRKPMSNQQCIVTAQGRKEITGPSAIVIQGGSIVADPEFYPVRFDHKSYLARPWKNFSRTIIMDTFIDDLIHPDGFFPWHTEVGPINMDTCFYAEYHNYGPGSNKSKRVKWAGIYNINSKAAHRFAPSKFFHGGDWIKDTGIPYFPTIPEHKKHKKTVLKW* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2985 588 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 62 216 IPR035513 -
Mtr1g2985 588 Pfam Pectinesterase 261 560 IPR000070 GO:0030599|GO:0042545
Mtr1g2985 588 Gene3D Invertase/pectin methylesterase inhibitor family protein 58 216 IPR035513 -
Mtr1g2985 588 Pfam Plant invertase/pectin methylesterase inhibitor 62 212 IPR006501 GO:0004857
Mtr1g2985 588 SUPERFAMILY Pectin lyase-like 258 573 IPR011050 -
Mtr1g2985 588 TIGRFAM PME_inhib: pectinesterase inhibitor domain 59 215 IPR006501 GO:0004857
Mtr1g2985 588 ProSitePatterns Pectinesterase signature 2. 406 415 IPR033131 -
Mtr1g2985 588 CDD PMEI-like_3 65 217 - -
Mtr1g2985 588 PANTHER PECTINESTERASE 10 575 - -
Mtr1g2985 588 SMART PMEI_2 58 212 IPR006501 GO:0004857
Mtr1g2985 588 Gene3D - 255 575 IPR012334 -
Mtr1g2985 588 PANTHER PECTINESTERASE 10 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2985 Mtr-Chr1 41010742 41012800 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2985 5 571 Carbohydrate Esterase AT3G05610 47.193 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2985 K01051 - gmx:100815272 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3635 7 53347260 53349407 Mtr1g2985 1 41010742 41012800 PCT