Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2982 ATGGGTATCGATCTTAAGGCAGGAGGTAAGAACAAAAAAACAAAAAGAACAGCACCAAAATCCAATGATATCTATCTCAAGCTTTTGGTCAAGCTTTATCGGTTCCTTGTTCGGAGAACTGGCAGCAATTTCAATGCTGTTATACTCAAGAGGTTGTTTATGAGCAAGGTTAACAAACCTCCACTATCTTTGTCAAGGTTGATCAAGTATACCAATGGGAAGGAAGGTAAAATTGCTGTCGTGGTGGGGGCTATAACTGATGATGTCCGTGTTAATGAAGTTCCAGCCATAAAGGTTACAGCACTCAGGTTTACCGAGAGGGCAAGGGCAAGAATAGAAAGTGCTGGTGGTGAATGCTTGACATTCGATCAGTTGGCTCTTAGGGCCCCTCTGGGACAAAACACGGTTCTTCTTAGAGGCCCAAAGAATGCTCGTGAAGCAGTGAAGCACTTTGGTCGTGCTCCTGGTGTCCCACAAAGCCACACCAAACCTTATGTTAGAGGAAAGTCAAGGAAGATCGAGAAGGCTAGAGGAAAGAGGAAGAGCAGAGGATTCAGAGTTTGA 564 0.445 MGIDLKAGGKNKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIKYTNGKEGKIAVVVGAITDDVRVNEVPAIKVTALRFTERARARIESAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGRAPGVPQSHTKPYVRGKSRKIEKARGKRKSRGFRV* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2982 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 187 IPR000039 GO:0003735|GO:0005840|GO:0006412
Mtr1g2982 187 PANTHER BNAC02G39900D PROTEIN 1 187 - -
Mtr1g2982 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Mtr1g2982 187 MobiDBLite consensus disorder prediction 153 187 - -
Mtr1g2982 187 Gene3D - 1 187 - -
Mtr1g2982 187 MobiDBLite consensus disorder prediction 165 187 - -
Mtr1g2982 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2982 Mtr-Chr1 41002251 41004373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2982 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 76.344 6.12e-101 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2982 K02883 - gmx:100499789 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2982 1 41002251 41004373 Mtr1g2982 1 41002251 41004373 ECH
Mtr7g3650 7 53486275 53488775 Mtr1g2982 1 41002251 41004373 PCT