Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2979 ATGGGTCGAGTAGATGCAGCTGGTTCAAAGGGAAAGAAGAAGGGAGTTATAACATTCACCATTGACTGTGCCAAGCCCGTTGAAGACAAGATCATGGACATCGCTTCTCTCGAAAAGTTCCTTCAAGAGAGAATTAAGGTTGGTGGTAAACCCGGTGCTCTTGGTGATGCTGTTACTGTTTCAAGGGAAAAGAGCAAGATTGCTGTTACTTCTGATAGCAACTTCTCCAAACGGTATCTCAAGTATTTGACCAAAAAGTACTTGAAGAAACACAATGTAAGGGATTGGCTCAGAGTGATTGCTTCAAACAAAGATAGAAATGTTTATGAGCTGAGGTACTTCAACATTGCTGAGAATGAAGGAGAGGAAGAAGACTGA 378 0.418 MGRVDAAGSKGKKKGVITFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKPGALGDAVTVSREKSKIAVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2979 125 Gene3D - 6 125 IPR038526 -
Mtr1g2979 125 PANTHER 60S RIBOSOMAL PROTEIN L22 5 125 IPR002671 GO:0003735|GO:0005840|GO:0006412
Mtr1g2979 125 Pfam Ribosomal L22e protein family 17 123 IPR002671 GO:0003735|GO:0005840|GO:0006412
Mtr1g2979 125 PANTHER - 5 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2979 Mtr-Chr1 40987289 40989472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2979 1 125 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 84.000 4.54e-63 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2979 K02891 - vvi:100261409 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2979 1 40987289 40989472 Mtr1g2979 1 40987289 40989472 ECH
Mtr7g3647 7 53439187 53441356 Mtr1g2979 1 40987289 40989472 PCT