Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2968 ATGAGTTGTGGTTCTGAGCTTCTTACCATGATCTTCATCATCATTATCACACTCTTGGTTCCTTTATCATCATCACAAAGGACTCACATTTTGAGTGTTGGTGCTTTAATCAATGCAGCTGGAAGCTTCCATGTTCATACTTTACAAGATAACTATTACATGAAAGAACAAGAAAATGAAAAGAAGCAGGTTCAGAAAATCTCAGGTTTAGATGAGAATGAAGAGAAACAAGGTTTTATAGTTGAAAAGTTTAGATCTTTACTTGGTTTAAAGAGTTTCCACAAAAGGGTACCTTCTAAATCCAATGGTGATTCTGATTCTGATTCTGATCAGTTTCTCACACCATCACCTTCTCCATCACAAAACATTGAAGCTGAAGTTGAAGCTCCAGCTCCAGCTCCAACACCTTCTCAAGTAATGCACTTTCACCCTCATTCTTATCATCAAAAGCATCACTTTCATTGGAATCAACCACCTAAAAAGCTTCATCATGATGATAGAGGCAGAACCAAAAGAATACTAGTAGCTGTTTTTGTTTCTGTAGGAGTTGCTGCATTTGTTATTTCTCTTGGCTTAATCTTATTCTGCAGGAAAAAATTCACAAATCACAAAAAGAAGAAACCAAAAAGAACAATGCCTCTTTGCAGCAGCAATACCAAAGGAAAAACAAAAGGCAAGGTGAGTTTAAATCCAGGACTAGATCTGTTCTATCTTGATGCATTAGGTGAAGATGTTGAACAACATGCTTGTACTTTGACAAAGACTAGTGACAATAATGTTAGTAGTTCTTTTACTAAGGAAATTGTTTCTGTTCATGAAGAAGAACTAGTAATAAAAAATGAACATGAATGTGTTGATAAAATTGTTCATGAAGATTGTGATTCATCAGAAGATGAAAGCTTTCATTCATTTGTTGATTCACAATCAAATACAAGACTTTCTAATGCTTCAGCTGGTAGCCTAAGTGACACACAATCTTTGTTATTGTCACCTCAAAATTCATTTTCATTATTACCAAACCAATTACCTAGTTCTCCACAAAACACAAATGATTCTCACCAACCACCTTATAGTCCAAAACAAAAAGACCAAGATATTGAAAATGAAACCTTTGTCCAATGTCCACAAACATCTAATTCCTCTCCACCTCCTCCTCCGCCGCCACCACCAACACCACCATTGAAAATGCCACTCTTTACTTTACATTCATTAACAACTTCATCTAGAGTTTCATCTCATTCTCCACTCTCATTGACATCTCATACCTTATCTTCTCCTGTAAATTCAGAAACTTCTTCAAGATCAAATCTTAGTCCTGAAAAAGATTCATTTTCTCCTTCTTCATCTAACCCTACAAAATCTCCTCCACCACCACCATGCCCCCCTCCATTTCCAAGAGGAAATAGCAACAAAAATGCAAAAACACCACCTCCTCCACCATATCAATTCCCTCAATCACCACTTGGTAAAGATGGTACACCATTGGCTAAACTCAAACCACTTCATTGGGACAAAGTAAGAGCTGCACCAAATCGTACAATGGTTTGGGACAAATTAAGATCAAGTTCATTTGAGTTGGATGAGGAAATGATTGAGTCACTTTTTGGCTATAATTTACAAAGTTCAATTAACAATGATGAAAGCAAGAGTAAAACACCATCACCAAGCAAGCATGTACTTGATCCAAAAAGGTTGCAGAACATAACAATACTCTCAAAAGCTCTGAATGTGACAGCTGAACAAGTATGTGATGCACTAATGCAAGGGAAGGGATTGTCTTTGCAACAATTAGAGGCATTGGTGAAAATGGTACCTACCAAGGAAGAAGAGGGTAAGCTCTTCAATTATAAAGGCAACATCAATGAATTGGGGTCCGCCGAAAAGTTTGTGAGGGCAGTACTTTGTGTACCATTTGCCTTTCAAAGAGTAGAAACAATGCTTTATAAAGAGACTTTTGATGATGAAGTTGTTCACCTAAGGAACTCATTTTCAATGCTAGAGGAGGCATGCAAGGAGCTAAGATCAAGCAGACTCTTCTTGAAACTTCTAGAAGCAGTACTCAAAACAGGAAATCGCATGAACGTTGGAACGATAAGGGGAGGTGCAAGAGCATTTAAACTCGATGCTCTACTAAAGCTTGCAGATGTTAAAGGAACCGATGGCAAAACAACCTTACTCCACTTTGTTGTTCAAGAGATTGTTCGTTCAGAAGGAATAAGAGTTTCAGATAGCATAATGGGAAAAATAAGCCAAAAAAGTAACAAAAACCGAACAGAAGAAGAGAAAGAAGAAGATTACAGAAAAATGGGACTAGAACTAGTGTCTGGTCTAAGTACTGAATTGTACAATGTTAAAAAGACAGCAACAATTGACTTAGATGTTCTTGCTAGTTCTGTTTCAAATCTATACGATGGAATGGTTAGGCTGAAACAACTAGTGGAAAATGAGTTGCATGAAGATGAAATGTGTCATAATTTTGTGATGTCTATGAAGTTGTTCTTGCAATATGTGGATGGAAATTTGAAGGAGTTAAGAGGAGATGAAGATAGAGTGATAGCACGTGTTAAAGAAATAACAGAATATTTTCATGGAGATGTTAGTAAGGAGGATAATCCACTTAGGATATTTGTTATTGTGAGAGATTTTATGGGAATGTTGGATAATGTTTGTAAAGAGCTTAGAAGGTCTAAAACTCCACGTACCCCAAACCCTCTTGCTCCTTTTAGATAG 2730 0.3681 MSCGSELLTMIFIIIITLLVPLSSSQRTHILSVGALINAAGSFHVHTLQDNYYMKEQENEKKQVQKISGLDENEEKQGFIVEKFRSLLGLKSFHKRVPSKSNGDSDSDSDQFLTPSPSPSQNIEAEVEAPAPAPTPSQVMHFHPHSYHQKHHFHWNQPPKKLHHDDRGRTKRILVAVFVSVGVAAFVISLGLILFCRKKFTNHKKKKPKRTMPLCSSNTKGKTKGKVSLNPGLDLFYLDALGEDVEQHACTLTKTSDNNVSSSFTKEIVSVHEEELVIKNEHECVDKIVHEDCDSSEDESFHSFVDSQSNTRLSNASAGSLSDTQSLLLSPQNSFSLLPNQLPSSPQNTNDSHQPPYSPKQKDQDIENETFVQCPQTSNSSPPPPPPPPPTPPLKMPLFTLHSLTTSSRVSSHSPLSLTSHTLSSPVNSETSSRSNLSPEKDSFSPSSSNPTKSPPPPPCPPPFPRGNSNKNAKTPPPPPYQFPQSPLGKDGTPLAKLKPLHWDKVRAAPNRTMVWDKLRSSSFELDEEMIESLFGYNLQSSINNDESKSKTPSPSKHVLDPKRLQNITILSKALNVTAEQVCDALMQGKGLSLQQLEALVKMVPTKEEEGKLFNYKGNINELGSAEKFVRAVLCVPFAFQRVETMLYKETFDDEVVHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIRVSDSIMGKISQKSNKNRTEEEKEEDYRKMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLYDGMVRLKQLVENELHEDEMCHNFVMSMKLFLQYVDGNLKELRGDEDRVIARVKEITEYFHGDVSKEDNPLRIFVIVRDFMGMLDNVCKELRRSKTPRTPNPLAPFR* 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2968 909 Pfam Formin Homology 2 Domain 491 886 IPR015425 -
Mtr1g2968 909 PANTHER FORMIN-RELATED 382 909 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Mtr1g2968 909 PANTHER FORMIN-RELATED 54 307 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Mtr1g2968 909 MobiDBLite consensus disorder prediction 400 449 - -
Mtr1g2968 909 MobiDBLite consensus disorder prediction 334 496 - -
Mtr1g2968 909 MobiDBLite consensus disorder prediction 104 123 - -
Mtr1g2968 909 SMART it6_source 488 901 IPR015425 -
Mtr1g2968 909 Gene3D Formin, FH2 domain 510 901 IPR042201 -
Mtr1g2968 909 SUPERFAMILY Formin homology 2 domain (FH2 domain) 501 897 - -
Mtr1g2968 909 MobiDBLite consensus disorder prediction 334 357 - -
Mtr1g2968 909 MobiDBLite consensus disorder prediction 378 396 - -
Mtr1g2968 909 PANTHER FORMIN-LIKE PROTEIN 54 307 - -
Mtr1g2968 909 PANTHER FORMIN-LIKE PROTEIN 382 909 - -
Mtr1g2968 909 ProSiteProfiles Formin homology-2 (FH2) domain profile. 488 909 IPR015425 -
Mtr1g2968 909 MobiDBLite consensus disorder prediction 96 141 - -
Mtr1g2968 909 MobiDBLite consensus disorder prediction 450 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2968 Mtr-Chr1 40908067 40912397 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2968 474 909 FH2 protein (formin) Gene Family AT3G05470 75.227 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2968 - - gmx:100811929 1055.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2968 1 40908067 40912397 Mtr1g2968 1 40908067 40912397 ECH