Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2956 ATGGCTGATTTTCAGACTTCTACCCACCGATCGAAGTGGATCTTCTCTCCTCAAAAATTGATTGAGAAATATAAAGCTGCCAATAAGAGAGCCAAACAAACCCTAGACACCTGTGGTGCTACTCTAATGGAAGTTGATGTTGATGGCTCTTTAACATATCCTCAACCCCACCCCAATGCAAACGATAATGGTGAAAAGCATTCTCGGATAAAACCTCTTAGTATTGAAGAAGAACAAAGTATAAAGGTATTTTATGAAAATAAGCTACAAGAAGTGTGTAACAATTTTCATTTCCCTCATAAGATCCAGGCAACAGCCCTCATCTTTTTTAAAAGGTTCTATCTGCAGTGGTCTGTCATGGAACATCAACCAAAAAATATAATGTTGACCTGCATATATGCTGCTTGTAAGATAGAAGAAAATCATGTATCGGCTGAGGAGCTTGGTAAGGGGATTTCACAAGATCATCAAATGATTCTCAATAATGAGATGATAGTTTATCAGAGTCTGGATTTTGATCTTATTGTTTATGCTCCATATCGCTCAGTTGAAGGTTTTACAGATTCTATGGAGGAACTTTGCATTTCTGGTGAGGACGAGCTTCAAAAATTCAAGGCTTTGCAAAACACAGCAAGACTGGAAGTTGATAAAATGATGCTTACAGATTCACCACTCTTATTTCCTCCTGGGCAGTTGGCCTTGGCTGCTCTGCGTACGTCAAATGCACTCCATACAGTTGTTGATTTTGATAGTTTTCTGAGCAGAATTTTCTCCCATCAAAATTCTACGCACACAATGACTGAGCTTCTTGAATCGTTGGATGCAATTGATTCTTGGGTTAGAAAATACAAAAGTCCTTCAGAGAAGGAATTGAAGCACATCAACCGGAAACTGAAGTCTTGCTGGGGCCATAGCTCTCATGACGAGGGAAAGAAGAGGGAAAAGAAATCAAAGCACAAGTCCAGAAAGAGCTCAAATGAAGCACTCAATACATAG 996 0.3926 MADFQTSTHRSKWIFSPQKLIEKYKAANKRAKQTLDTCGATLMEVDVDGSLTYPQPHPNANDNGEKHSRIKPLSIEEEQSIKVFYENKLQEVCNNFHFPHKIQATALIFFKRFYLQWSVMEHQPKNIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLDFDLIVYAPYRSVEGFTDSMEELCISGEDELQKFKALQNTARLEVDKMMLTDSPLLFPPGQLALAALRTSNALHTVVDFDSFLSRIFSHQNSTHTMTELLESLDAIDSWVRKYKSPSEKELKHINRKLKSCWGHSSHDEGKKREKKSKHKSRKSSNEALNT* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2956 331 CDD CYCLIN 89 167 IPR013763 -
Mtr1g2956 331 PANTHER CYCLIN 1 328 IPR043198 GO:0006357|GO:0016538
Mtr1g2956 331 Pfam Cyclin C-terminal domain 179 277 IPR031658 -
Mtr1g2956 331 Gene3D - 63 175 - -
Mtr1g2956 331 PANTHER CYCLIN-H 1 328 - -
Mtr1g2956 331 SUPERFAMILY Cyclin-like 67 176 IPR036915 -
Mtr1g2956 331 MobiDBLite consensus disorder prediction 301 331 - -
Mtr1g2956 331 SUPERFAMILY Cyclin-like 179 305 IPR036915 -
Mtr1g2956 331 Pfam Cyclin, N-terminal domain 89 174 IPR006671 -
Mtr1g2956 331 SMART cyclin_7 87 168 IPR013763 -
Mtr1g2956 331 Gene3D - 177 282 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2956 1 280 Core Cell Cycle Gene Families AT5G27620 62.857 2.49e-132 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2956 K06634 - gmx:100800023 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2956 1 40813188 40816791 Mtr1g2956 1 40813188 40816791 ECH