Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2933 ATGGAAGTTAATTCAAGTACCACTGTACCTGCAGGGCCACCAACTATTTCTACAAAGAACCATACTTTCATACACCATTACCATCACTTACATTCAGAAAAAGATTACCATAACCATGTTGGACATTTTCCCTTCAAAACCATTATTATAATCATCACAATGGTTGCCTTAATTATGCTCCTATTTACCATTTTTTTGGTCGTATGCTTGATCCGTCGCCAAAAGTCTTCTAGCAAAAATGGAGTTTGCAAAGATGATTGTGAGAGTAGAGTGCTTCATGATACAAGCAGAAGACACATTGCTCCAACAATTCTGTCCTTTGATTCTAGCCCAGATGTTAAAGGTGGGTGTCTTTATGGGGGAAATTTGAGCAGGACACCACCAACACCTAAATTTCGAGGAGTGCAAGTTTTCACTTATAGGGAGCTAGAAGTTGCTACTAATGGTTTCAATGAAGCAAATGAGATTGGTAATGGAGGAATTAATGGTTTGATGTATAAAGGAGTCTTAAGTGATGGAACTTTGGCAGCCATTAAGTTGCTTCAGAGTGAGGGTAAGCAAGGAGAGCGTGCATTCAGAATAGAGGTCGATCTCCTAAGCCAATTGCGGTCTCCTTATTTGGTGGAGTTACTTGGCTATTGTGCTGATCAACACCACAGGTTATTGATTTTTGAATACATGCCAAATGGTACACTCCAACACCATCTTCATTCCCTCAACGATAAAACTCAGCCATTGGATTGGTGGTCCCGGATGAGGATAGCCCTTGATTGTGCCAGGGCCTTGGAGTTCCTGCATGAACATGCTGTTTCACCCGTGATACATAGAGACTTCAAGACTTATAATGTTTTACTGGATCAGAATTTCCGTGCAAAGGTGGCAGATTTTGGATTGGCTAATATGGGATCAGAGAAGAGAAATGGCCAGGTTTCTACCCGTGTGTTGGGGACCACTGGATATTTGGCACCAGAGTATGCCTCCACGGGTAAGCTTACTACAAAGTCGGATGTTTACAGCTACGGTGTAGTTCTTCTCGAATTACTAACAGGACGTGTACCAGTTGATATTAAGCGGCCCACCGGAGAACATGTCCTCGTCTCTTGGGCTCTTCCAAGATTGACAAACAGAGAAAAAGTTGTGGAAATGGTTGACCCAGTTCTACATGGGCAGTACTCAAAGAAGGCTTTAGTTCAGGTAGCTGCCATCGCCGCAATGTGCATACAGCCAGAAGCTGATTACAGGCCACTCATGACAGACGTTGTACAATCATTGATACCACTTGTGAGAGCCCATTCTCTTTCCAGTTCCCTAAGATTTCAGAAACAAATACCAAGTTATTAG 1341 0.4258 MEVNSSTTVPAGPPTISTKNHTFIHHYHHLHSEKDYHNHVGHFPFKTIIIIITMVALIMLLFTIFLVVCLIRRQKSSSKNGVCKDDCESRVLHDTSRRHIAPTILSFDSSPDVKGGCLYGGNLSRTPPTPKFRGVQVFTYRELEVATNGFNEANEIGNGGINGLMYKGVLSDGTLAAIKLLQSEGKQGERAFRIEVDLLSQLRSPYLVELLGYCADQHHRLLIFEYMPNGTLQHHLHSLNDKTQPLDWWSRMRIALDCARALEFLHEHAVSPVIHRDFKTYNVLLDQNFRAKVADFGLANMGSEKRNGQVSTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPTGEHVLVSWALPRLTNREKVVEMVDPVLHGQYSKKALVQVAAIAAMCIQPEADYRPLMTDVVQSLIPLVRAHSLSSSLRFQKQIPSY* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2933 446 Gene3D Phosphorylase Kinase; domain 1 124 226 - -
Mtr1g2933 446 Pfam Protein tyrosine and serine/threonine kinase 155 424 IPR001245 GO:0004672|GO:0006468
Mtr1g2933 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Mtr1g2933 446 SUPERFAMILY Protein kinase-like (PK-like) 127 424 IPR011009 -
Mtr1g2933 446 PANTHER OS01G0750732 PROTEIN 1 437 - -
Mtr1g2933 446 Gene3D Transferase(Phosphotransferase) domain 1 227 441 - -
Mtr1g2933 446 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 1 437 - -
Mtr1g2933 446 ProSiteProfiles Protein kinase domain profile. 150 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2933 446 CDD STKc_IRAK 156 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2933 Mtr-Chr1 40591483 40595317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2933 46 437 Receptor kinase-like Gene Family AT3G58690 54.408 6.02e-146 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Mtr1g2933 PK_Tyr_Ser-Thr 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2933 - - mtr:MTR_1g082580 878.626