Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2928 ATGTCTATTGTTATTTTCAATTCAGTCCAATCACTTAACTTCAGCAGCATCAATGCTGTTAAGGCCTTGGAATTGTTGGGGACCTTCCTTTACCTCTTTTGTACTAGTACTATCCTTGGCGTAGCAGTTGGCCTTTTAAGTGCTTATCTTATTAAAACATTTTACTTTGGAAGGCACTCTACTGATCGTGAAGTTGCACTTATGATGTTGATGGCATATTTTTCATATATGATCGCTGAGCTTTTGGAACTCAGTGGTATTTTGACTATTTTCTTCTGTGGCATTGTTATGTCACACTACACATGGCACAATGTTACAGGAAACTCAAGGACAACAACAAAGCACTCCTTTGCAACCATGTCCTTCATTTCTGAAACCTTCATTTTTCTATATGTTGGCATGGATGCTTTAGACATTGACAATTGGAAAGCAAGCAAAGCCAGCATAGGAACTTCAATTGCGGTCAGCTCAACGTTTCTTGCATTGGTTTTGATTGGAAGAGCAGCTTTTGTGTTCCCTATTGCAAACATTTCAAATTACTTCGTGACAAGAGAGAGTGCCAAAATTGAGTTTCGATCTCAGTTCATAATATGGTGGGCAGGACTAATGAGAGGTGCAGTGACTATTGCATTGTCTTGCAACCAGGCAAGTACATGCTGTAACTTCATTCTTTTTCTGAAATCTTTATTGTAA 693 0.3853 MSIVIFNSVQSLNFSSINAVKALELLGTFLYLFCTSTILGVAVGLLSAYLIKTFYFGRHSTDREVALMMLMAYFSYMIAELLELSGILTIFFCGIVMSHYTWHNVTGNSRTTTKHSFATMSFISETFIFLYVGMDALDIDNWKASKASIGTSIAVSSTFLALVLIGRAAFVFPIANISNYFVTRESAKIEFRSQFIIWWAGLMRGAVTIALSCNQASTCCNFILFLKSLL* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2928 230 Pfam Sodium/hydrogen exchanger family 1 211 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr1g2928 230 PANTHER SODIUM/HYDROGEN EXCHANGER 1 218 - -
Mtr1g2928 230 PANTHER SODIUM/HYDROGEN EXCHANGER 1 218 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2928 Mtr-Chr1 40512104 40515359 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2928 2 215 Antiporters AT3G05030 64.953 5.59e-99 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2928 K14724 - tss:122660255 351.288