Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2919 ATGGCAATTGAGGGTGACTTTTGCCCGATAAATCAAGGTTTATGGAAACATAAGAGAAGTTTTGCTAGTAAATCAAAGAAGATAGGATCTCTCTTTGCTTGTTCTGCTTCTGCTCAAGACTTAAGAAATATGGACCTTGAGAAAGAGAAAGATGACGAGGCATCTCCAAGAGGAGTTTTAGAGGCTTGTGTTAAAGGCTTTGATGCTCAACAACTACCTGAGCCAGAAACCAGTTGTTCCAATTCGAGGGCGCGATCCCATTGGGGAAAATTTTTTAAATTGTGGAAGAGAAAATCAGTTAAACGCCTAACTTCTATTCATTCAATTGGTGTGCCAAAGATACCAAAATGGAAAAGTAGAAGCACTAGGGAAAATTTTGTTACGAGTAATCTATACAATTTTAGATCTTCTTTGGTGACTTTCAGCCTCTCTGACCTAAGAAATGCAACCAACCATTTCAGCCATGAAAATTTGATTGGAAGAGGTGGTTTTTCTGAGGTTTACAAGGGTTGTCTCCAAGATGGACAACTAATAGCTGTAAAGAAAATGACTACAGGGAGCACAGATGAAAAGACAGCTGGCTTTCTATCTGAGTTAGGAGTTATTGCTCATGTTGATCATCCTAATACCGCAAAGCTTGTTGGATGTTGTGTAGAGGGAGAAATGCATCTTGTCTTCGAATTGTCTACACTGGGAAGTTTAGGATACGTTCTTCATGGTTCAGATAAAACCAAATTGGATTGGAGTAAAAGGTATAAAGTTGCTCTCGGAATTGCTGATGGTCTTCTCTATTTGCATGAGAATTGTCAAAGGCGAATAATTCATAGAGATATTAAGGCAGAAAATATACTACTCACAGAGAATTTTGATCCACAGATTTGTGATTTTGGACTTGCAAAGTGGTTACCAGAACAATTGACTCACCATAATATGTCCACATTTGAAGGCACATTCGGATATTTATCTCCTGAATATTGCATGCATGGCATAGTGGATGAGAAAACTGATGTTTACTCTTTCGGCGTTCTACTTTTGGAGATCATAACTGGGCGTAAGGCTTTGGATCGTATGCAGACAAGTGTCGTGACATGGGCAAAACCTTTGCTTGATGCTAATAATATCAAGGACGTTGTTGATCCTTCTCTTGGAGGTAACTATGACCAAGGACAGATGGGATGTGTTAGTTTGACTGCATCAATATGTGTTGAGCAGTCTCCTATTTTACGCCCTCGCATGAGTCAGATAGTAACACTGCTAAGAGGGGAAAAATCTGTCATGTATGCAAGAGCATGTAGCAAAAGGAGGAATCTCCAAAGAACATATTCAGAAGAGCTACTTGATGCACAGGAATACAACTCAACAAAATATCTAAGAGATCTCAATCGACATAAGAAGATTTTGGGTCTTGAGGTCTAA 1416 0.3912 MAIEGDFCPINQGLWKHKRSFASKSKKIGSLFACSASAQDLRNMDLEKEKDDEASPRGVLEACVKGFDAQQLPEPETSCSNSRARSHWGKFFKLWKRKSVKRLTSIHSIGVPKIPKWKSRSTRENFVTSNLYNFRSSLVTFSLSDLRNATNHFSHENLIGRGGFSEVYKGCLQDGQLIAVKKMTTGSTDEKTAGFLSELGVIAHVDHPNTAKLVGCCVEGEMHLVFELSTLGSLGYVLHGSDKTKLDWSKRYKVALGIADGLLYLHENCQRRIIHRDIKAENILLTENFDPQICDFGLAKWLPEQLTHHNMSTFEGTFGYLSPEYCMHGIVDEKTDVYSFGVLLLEIITGRKALDRMQTSVVTWAKPLLDANNIKDVVDPSLGGNYDQGQMGCVSLTASICVEQSPILRPRMSQIVTLLRGEKSVMYARACSKRRNLQRTYSEELLDAQEYNSTKYLRDLNRHKKILGLEV* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2919 471 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 31 465 - -
Mtr1g2919 471 ProSiteProfiles Protein kinase domain profile. 153 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2919 471 Pfam Protein tyrosine and serine/threonine kinase 156 363 IPR001245 GO:0004672|GO:0006468
Mtr1g2919 471 ProSitePatterns Protein kinases ATP-binding region signature. 159 182 IPR017441 GO:0005524
Mtr1g2919 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Mtr1g2919 471 SMART serkin_6 153 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2919 471 Gene3D Transferase(Phosphotransferase) domain 1 230 445 - -
Mtr1g2919 471 SUPERFAMILY Protein kinase-like (PK-like) 132 419 IPR011009 -
Mtr1g2919 471 Gene3D Phosphorylase Kinase; domain 1 114 227 - -
Mtr1g2919 471 PANTHER OS08G0249100 PROTEIN 31 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2919 Mtr-Chr1 40458809 40463698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2919 138 471 Receptor kinase-like Gene Family AT1G53420 40.988 1.67e-75 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mtr1g2919 PK_Tyr_Ser-Thr 4.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2919 - - cam:101512181 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2919 1 40458809 40463698 Mtr7g3709 7 54046419 54051829 ECH
Mtr1g3264 1 43948390 43951784 Mtr1g2919 1 40458809 40463698 ECH
Mtr2g0694 2 7058966 7062481 Mtr1g2919 1 40458809 40463698 ECH
Mtr1g2919 1 40458809 40463698 Mtr1g2919 1 40458809 40463698 ECH
Mtr7g3709 7 54046419 54051829 Mtr1g2919 1 40458809 40463698 PCT