Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2914 ATGGAGTGTAACAAGGATGACGCTGTGAAGGCTAAGCAACTGGCAGAAACTAAAATGCAAAGGGGTGAATTTGTAGATGCACTGAAGTTTGCTAACAAGGCCAAAAGGCTCTATGCTGATGTTGAAAACATTGCTCAGATCCTTGCTGTTTGTGAGGTTCACAATGCTGCACTCAACAAGCTGTCTAAGTATGATATGGACTGGTATGGAGTTCTTCAGACTGAAAAATTATCCGAGGAAGCAATCATAAAGAAACAGTACAAGAAGCTTGCACTGCTACTTCATCCTGATAAAAATAAATCTGCTGGTGCAGAAGCTGCTTTCAAGTTGATTGGGGAAGCCAATAGGGTGTTGAGTGATAAAGCAACGCGGTCTTTATACGACATAAAGGTTAAAGCCCATGTTAGAGCTGCAGCATCTAAGACCTCATCCCATCCCTCTAATGGGAAACCTGCAGCAAATCAAGTTCCTAATGCAACAAAACATCAGAAAAAATGTTCTTCAAACTCTCCTTCTTTGAATCCCCATCTGAAACCTGCACAGCCGACATTCTGGACAATGTGCAGGCATTGTAATACCAAATTCCAGTTCTACATTTATGTTATAAATAAGGCCCTACTCTGTCAGAAATGTAAGAACTCATTTGTAGCTCTTGCTATGAATCCACAGACTTTCCCATCATTCGTACAGTTTGGTGCCCCGAAAAAGGTTCCAACGCAGGATCCACCAAAACCAGCCTGTAAAAGTAATGGTGGAACATCCGTTAGTAGTGGATGTGCAGACACTTTTGTGCCGTCGTATCCTTCATGTATGAAAACATGTGCTAATGGAGTTGGTAAGCAACATAAAGATGAGAAGAGTAAGGATGGCTTTATTCCTGTGTCCAAGCCAATGAAGTCACAATCTTCAAACAATGTTGGAAGTAAGAGAGTGAGACAACCAGAACCAGATTCAACAGAGAGATTCAACACTGGAAATGATTATGAAAAGAAAGGTTTCAATGTTCGAGAAAATGATGCTGATCCTTCAAGATTGAATGTCAGAAGGTCTTCCAGACAAAAGCAACACGTTTCATATAAGGAAAACCATGAAGATGACCATGATGCTGTTCCTTCCAAAAAGCCACGACAAGATGAATCATCGAACAATGCTGAAGTTGAGAGTAAGAACGTATCTGAAGATTCTCATTTTCAAGGTGATACGGTATTGGAGTCGGATGTTGATCCACCAAATTCAGATATGCCTTCTAGTCCAGAGACCATTGTTTGTCCTGATCCAGATTTCAATAATTTTGAGAAGGACAAGGCTGATGATTGTTTTGCTGTTAATCAATTATGGGCAATTTATGATACCACCGATGCTATGCCAAGATTTTATGCTCTTGTCAAGAAAGTGACCTTCCCTTTCAAGTTGCAGATTACTTGGTTGGAAGCTGACCCAGATGAAGATAGCGAGGTTCATTGGTATAATGCAGATTTGCCTATTGCTTGTGGCAAGTTCAAACTTGCTAACTCTCAGAAAACTACAGATCGTGGTATGTTCTCTCACCAGATACAGTTTATAAAAGGAAATGAGAAAGATTCTTACCTAGTGCTTCCCAAGAAGGGAGAAACCTGGGCGATTTTCAGAAATTGGGATATCAATTGGAGTTCTAATCCAGAAAATTATCTGAAGCGTGAATTTGCTTATGTAGAAATCCTTTCAGATTATACTGAAAATCTTGGCATTCAAGTAGCTTATCTAGGCAAAGTAAAGGGATTTACTAGCCTCTTTGAGAAAACTGGGAAGAATGGGGATAACACATTCACATTTTCTATTCCACCAAATCAAACTTATAGGTTCTCACATCAAATTCCTTCATTCAGGATGAGTGGGGATGAAAGGGAAGGTGTTCCAAGAGGCTGTTTTGAGTTTGATCCTGCTGCATTGCCAACTGAGATATTTGAAGCTGAAAAAGATTCCTCAATCCCTGGAAGATCAAGGGAAAAGGTTTGA 1995 0.401 MECNKDDAVKAKQLAETKMQRGEFVDALKFANKAKRLYADVENIAQILAVCEVHNAALNKLSKYDMDWYGVLQTEKLSEEAIIKKQYKKLALLLHPDKNKSAGAEAAFKLIGEANRVLSDKATRSLYDIKVKAHVRAAASKTSSHPSNGKPAANQVPNATKHQKKCSSNSPSLNPHLKPAQPTFWTMCRHCNTKFQFYIYVINKALLCQKCKNSFVALAMNPQTFPSFVQFGAPKKVPTQDPPKPACKSNGGTSVSSGCADTFVPSYPSCMKTCANGVGKQHKDEKSKDGFIPVSKPMKSQSSNNVGSKRVRQPEPDSTERFNTGNDYEKKGFNVRENDADPSRLNVRRSSRQKQHVSYKENHEDDHDAVPSKKPRQDESSNNAEVESKNVSEDSHFQGDTVLESDVDPPNSDMPSSPETIVCPDPDFNNFEKDKADDCFAVNQLWAIYDTTDAMPRFYALVKKVTFPFKLQITWLEADPDEDSEVHWYNADLPIACGKFKLANSQKTTDRGMFSHQIQFIKGNEKDSYLVLPKKGETWAIFRNWDINWSSNPENYLKREFAYVEILSDYTENLGIQVAYLGKVKGFTSLFEKTGKNGDNTFTFSIPPNQTYRFSHQIPSFRMSGDEREGVPRGCFEFDPAALPTEIFEAEKDSSIPGRSREKV* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2914 664 MobiDBLite consensus disorder prediction 278 292 - -
Mtr1g2914 664 PRINTS DnaJ domain signature 69 87 IPR001623 -
Mtr1g2914 664 PRINTS DnaJ domain signature 87 102 IPR001623 -
Mtr1g2914 664 PRINTS DnaJ domain signature 103 123 IPR001623 -
Mtr1g2914 664 Pfam DnaJ domain 67 128 IPR001623 -
Mtr1g2914 664 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 664 - -
Mtr1g2914 664 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Mtr1g2914 664 Gene3D DnaJ domain 53 150 IPR036869 -
Mtr1g2914 664 CDD DnaJ 67 120 IPR001623 -
Mtr1g2914 664 MobiDBLite consensus disorder prediction 140 174 - -
Mtr1g2914 664 MobiDBLite consensus disorder prediction 313 394 - -
Mtr1g2914 664 MobiDBLite consensus disorder prediction 277 420 - -
Mtr1g2914 664 SUPERFAMILY Chaperone J-domain 59 133 IPR036869 -
Mtr1g2914 664 MobiDBLite consensus disorder prediction 138 174 - -
Mtr1g2914 664 SMART dnaj_3 66 123 IPR001623 -
Mtr1g2914 664 MobiDBLite consensus disorder prediction 296 312 - -
Mtr1g2914 664 Pfam Domain of unknown function (DUF3444) 418 627 IPR024593 -
Mtr1g2914 664 PANTHER - 1 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2914 Mtr-Chr1 40393362 40396697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2914 4 226 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 28.384 1.56e-16 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2914 - - mtr:MTR_1g060440 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2914 1 40393362 40396697 Mtr1g2914 1 40393362 40396697 ECH
Mtr7g3718 7 54121104 54126690 Mtr1g2914 1 40393362 40396697 PCT