Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2910 ATGGCTATTGAAATTACTTCTATTGTTTCAAAACTATCAATGTTATCCACTTCCGATCATGCTTCTGTTGTTTCTATGAACTTGTTTGTGGCACTTCTGTGTGCTTGTATTGTCCTTGGTCATCTTCTCGAGGAGAATCGCTGGATGAATGAATCCATCACTGCCCTTTTGATTGGTATATGCACTGGTGTAGTGATTTTGCTGTTTAGTGGTGGAAAAAGTTCGCATATTCTTGTTTTCAGTGAAGATCTTTTCTTTATATACCTGCTGCCGCCAATTATATTCAATGCCGGGTTTCAAGTAAAGAAAAAGCAGTTTTTTGTCAACTTCATGACTATCACATCATTTGGAGCTATTGGCACATTAATATCTTGTGTTATTATAACCACGGGTGCTACTTTTGCTTTTAAGAGGATGGATATTGGGACACTGGAAATCGGCGATTACCTAGCTATTGGAGCAATATTTGCCGCAACAGATTCCGTTTGCACATTGCAGGTGCTAAATCAGGATGAGACACCTTTATTGTATAGTCTTGTATTTGGGGAAGGTGTTGTGAATGATGCTACCTCAGTTGTGCTTTTCAATGCAATTCAAAGCTTTGATCTTAACCAACTTAACCCTTCAATTGCATTGCACTTCTTGGGCAACTTCCTGTATTTGTTTGTAGCAAGCACACTCCTTGGTGTTGTGACAGGTCTGCTTAGTGCTTACGTCATCAAAAAGCTGTACATTGGCAGGCACTCCACAGATCGTGAGGTTGCTCTTATGATGCTAATGGCATACCTCTCCTATATGCTGGCTGAGTTATCCTATCTGAGTGGCATTCTTACCGTATTCTTTTGTGGTATTGTAATGTCTCATTATACCTGGCATAATGTGACGCAGAGTTCAAGAATCACTACTAAGCATTCTTTTGCTACCTTGTCCTTTGTTGCTGAGATCTTTATCTTCCTTTATGTTGGTATGGATGCCCTGGACATTGAAAAATGGAAGTTTGTTAGTGATAGTCCTGGAACATCTATAGCAGCAAGTTCAGTATTGTTGGGTCTAATACTTCTTGGAAGAGCAGCGTTTGTTTTCCCCTTATCCTTCTTATCCAACTTGACTAAAAAATCACAACATCAGAAGATCTCCTTCAGACAGCAAGTGATCATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTTTCAATGGCACTTGCGTATAATCAGTTCACCATGTCGGGGCATACTCAACTGCGTAGCAATGCAATCATGATAACCAGCACCATCACTGTTGTCCTTTTCAGCACAGTGGTGTTTGGTTTGCTGACTAAGCCACTTATAAGGCTTCTACTACCTCATCCTAAAATCACAAGCAGCATGACAACCACAGAATCGACTACTCCAAAATCATTCATTGTCCCACTTCTAGGAGATTCCCGAGATTCTGAAGCTGATCTTGAAGGCCATGAAATTCACCGACCAAACAGCCTTCGTGCTTTACTATCAACTCCAACTCACACTGTTCATCGATTATGGCGAAAGTTTGATGATTCATTCATGCGTCCTGTTTTTGGTGGTAGAGGTTTTGTTCCTGTAGAACCTGGCTCACCAAGTGAACGCAATGGTAATCAATGGGGTTGA 1626 0.4102 MAIEITSIVSKLSMLSTSDHASVVSMNLFVALLCACIVLGHLLEENRWMNESITALLIGICTGVVILLFSGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFMTITSFGAIGTLISCVIITTGATFAFKRMDIGTLEIGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLNQLNPSIALHFLGNFLYLFVASTLLGVVTGLLSAYVIKKLYIGRHSTDREVALMMLMAYLSYMLAELSYLSGILTVFFCGIVMSHYTWHNVTQSSRITTKHSFATLSFVAEIFIFLYVGMDALDIEKWKFVSDSPGTSIAASSVLLGLILLGRAAFVFPLSFLSNLTKKSQHQKISFRQQVIIWWAGLMRGAVSMALAYNQFTMSGHTQLRSNAIMITSTITVVLFSTVVFGLLTKPLIRLLLPHPKITSSMTTTESTTPKSFIVPLLGDSRDSEADLEGHEIHRPNSLRALLSTPTHTVHRLWRKFDDSFMRPVFGGRGFVPVEPGSPSERNGNQWG* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2910 541 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 25 446 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Mtr1g2910 541 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Mtr1g2910 541 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Mtr1g2910 541 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Mtr1g2910 541 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Mtr1g2910 541 Pfam Sodium/hydrogen exchanger family 29 442 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr1g2910 541 PANTHER SODIUM/HYDROGEN EXCHANGER 7 539 IPR018422 GO:0006812|GO:0015299|GO:0016021
Mtr1g2910 541 Gene3D - 146 197 - -
Mtr1g2910 541 PANTHER SODIUM/HYDROGEN EXCHANGER 2 7 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2910 Mtr-Chr1 40350780 40356861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2910 7 539 Antiporters AT3G05030 77.467 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2910 - - gmx:732573 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3722 7 54167694 54171946 Mtr1g2910 1 40350780 40356861 PCT