Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2906 ATGATGGTTTGTAATGAAGAAGAAAAGATTGAGGTGTTTTCAGAAAATGAAACTGAGGTTTCTAAGTCAGATTCAGTTGATGGGTCGTTACCGGTTTCGACTGTTTTCACTGATGTTGGAGTTGTGCCTGAGCAACAAAAGAATGAGCTTCAACACTTCATATCCAATTTGCAAAAAGAAGTTGAGGAGCTGAGGCTGAAGCAGAGAAAAGTGGATGAAAAGAGGAGAGAAGCACTGAGTAAGATATTGGATATAAAAGGGAGCATTAGAGTGTTTTGTAGAATTCGACCGGTTCATTTGACCGAAAAGAGAAGAAATTCTGAACCTGTATCAGCTGGATCCGAGAGAATTCGGGTTAAGTTTGGAGGAACAAGGAAAGATTTTGAGTTTGATAAGGTTTTTCCTCAAGAAGCAAGCCAAGAAAGTGTTTTTGTTGATGTCGAGCCGATTCTAAGATCTGCAATGGACGGACACAATGTGTGCGTTTTCGCTTACGGTCAAACAGGCACAGGAAAGACATTCACCATGGATGGTACAAATGAGCAGCCAGGGATTATTCCTCGTGCTCTCGAAGAGCTCTTTCGTCAAGCATCCATGGATGGTTCATCTTCTTTTACTTTTTCAATGAGTATGTTGGAAGTTTACATGGGCAATGTCAGGGATCTGCTGGCTCCCAGACAATCTTGTAGACCACACCAACCTCTGGCAAATAGCAATCTCAACATCCAAACTGATCCAAAGGGATTGGTGGAAATTGAGGGTCTCTCAGAAGTGCAAATTTCTGATTGTGCTAAAGCCAAATGGTGGTACAACAAGGGAAGACGATGCAGATCCACGTCGTGGACTAATGTAAATGAAGCATCAAGCAGATCACATTGCTTGACAAGGATAAGCATATTTAGACGCGGGGATACTTCAGAAGCCAAAACCGAAACAAGTAAATTGTGGATGGTTGATCTTGGAGGCAGCGAGCGGTTGCTAAAAACTGGGGCCAGAGGACTAACACTTGATGAAGGCCGAGCTATTAATCTTTCTCTTTCAGCTCTAGCTGATGTCCTTGCAGCTTTGAAGAGAAAGAGGAGTCATGTACCTTACAGAAATAGCAAGCTGACCCAACTACTGAGAGATTCTCTTGGTGATGGCTCGAAGGTCTTGATGCTTGTGCATATTAGCCCATCTGAAGAAGATGTTTGCGAGACGATTTGTTCTTTAAACTTTGCAAAGAGAGCAAGAGCAATAGAGTCCATTAAAGAAGTGCCCATGGAATTGAAGAAACAAAAGGAGATGAAGATTATGGAGCTCGAGGAAAACATTAAGGAAGCTGAAAAACAACGTCAGAGTTTAGGTGATCAAATACAGAATGTTGAGTTAAAGTTATGCGAGAATAAAAAGCTCTTTTCAGCCACATATAATCTTCAGGAAAGTGATGACTTGGTAACCTCTTCTAGCCTCAAAGATGATTTCAAAGAGGTCACCGAAACTCCTAAAGCATCTAAGAAGTCTACTCCAAGAAGTGTCTCCAATTCAGTGCCTCGATTCATGAGTTCAACTGTTGCTAGTCGGCATAGGCAAATTGCTTCTGAGCAAGAAATTGGAGGGAGAACAAAAAGTTTAAGATCAGTGGTCACCAGAAATTCAATCCAGTTTCCATCTTCTCAATCATTAAGTTATTCAGATCTTCGCATCAAAGCAATATTGCGAAGTTCAACTGGAATTGGAAAATCTCGGCATGCTGAAACAAGTAATGTTCCAAATACCATTCATACAGAAAGGCCTAATTGCAATGAATTGGAATCAAAAGTCTCAACTCCTCGAAGTACAATGGTTACATCGTCAGATTCAAATTTGAGAGTAACATTGTGTCGTCATAGAAGAAGGATGTCTAACCTGATCTAA 1896 0.4098 MMVCNEEEKIEVFSENETEVSKSDSVDGSLPVSTVFTDVGVVPEQQKNELQHFISNLQKEVEELRLKQRKVDEKRREALSKILDIKGSIRVFCRIRPVHLTEKRRNSEPVSAGSERIRVKFGGTRKDFEFDKVFPQEASQESVFVDVEPILRSAMDGHNVCVFAYGQTGTGKTFTMDGTNEQPGIIPRALEELFRQASMDGSSSFTFSMSMLEVYMGNVRDLLAPRQSCRPHQPLANSNLNIQTDPKGLVEIEGLSEVQISDCAKAKWWYNKGRRCRSTSWTNVNEASSRSHCLTRISIFRRGDTSEAKTETSKLWMVDLGGSERLLKTGARGLTLDEGRAINLSLSALADVLAALKRKRSHVPYRNSKLTQLLRDSLGDGSKVLMLVHISPSEEDVCETICSLNFAKRARAIESIKEVPMELKKQKEMKIMELEENIKEAEKQRQSLGDQIQNVELKLCENKKLFSATYNLQESDDLVTSSSLKDDFKEVTETPKASKKSTPRSVSNSVPRFMSSTVASRHRQIASEQEIGGRTKSLRSVVTRNSIQFPSSQSLSYSDLRIKAILRSSTGIGKSRHAETSNVPNTIHTERPNCNELESKVSTPRSTMVTSSDSNLRVTLCRHRRRMSNLI* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2906 631 Coils Coil 47 77 - -
Mtr1g2906 631 Pfam Kinesin motor domain 94 413 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr1g2906 631 PANTHER KINESIN-LIKE PROTEIN KIN-14D ISOFORM X1 15 626 - -
Mtr1g2906 631 ProSiteProfiles Kinesin motor domain profile. 88 413 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr1g2906 631 SMART kinesin_4 86 421 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr1g2906 631 MobiDBLite consensus disorder prediction 489 532 - -
Mtr1g2906 631 Gene3D Kinesin motor domain 34 416 IPR036961 -
Mtr1g2906 631 PANTHER KINESIN-LIKE PROTEIN KLP-3 15 626 - -
Mtr1g2906 631 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 451 IPR027417 -
Mtr1g2906 631 MobiDBLite consensus disorder prediction 498 532 - -
Mtr1g2906 631 Coils Coil 424 458 - -
Mtr1g2906 631 PRINTS Kinesin heavy chain signature 157 178 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr1g2906 631 PRINTS Kinesin heavy chain signature 282 299 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr1g2906 631 PRINTS Kinesin heavy chain signature 314 332 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr1g2906 631 PRINTS Kinesin heavy chain signature 363 384 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2906 Mtr-Chr1 40274616 40278952 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2906 46 413 Calmodulin-binding Proteins AT5G65930 39.840 6.22e-73 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2906 - - gmx:100785581 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2906 1 40274616 40278952 Mtr1g2906 1 40274616 40278952 ECH