Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2891 ATGCTTTCACCATTGGTTTCTTGGATTTTGTCAACCTCGTCATCTTCCTCTTCATCATCCGAAGAAGAAGAAGAAGAAAGCCTTGACATTAACAATGACGATTCAGACAATGAAAAGTTTGACAATGACAATGTTGAAGACCAAATGGACAATGTGGATGATGACGAAAAGGACCATTTTCTATGTCCATACAATGTGGATGAAGACCAAATGGACAATATTCCCATTGCACTTGCCGTTTCTGATGCATCCCCCGTTGTGACGGTGGCCATGGCTGCCCCCGCAGATGACACAAACGCGGCAACAAACACAGCCACCACCTCGGCTACTACCACTATAACAACACGCTCAAAACGACAATATAACAAAAAGTATTCAGACGGAGTTAAACAATATCAGAGGCTATGGACGAAGCAGGATGAGATTGAACTGTTGAAGGGATATCTAGATTACATTAAACAGCAAGGAAGAGCAAATACTACTATTCAAAGCGGCGTAGCTTCATTCTATGATCAAGTTATTCCCAAATTCAGCGTGGAATTCAATAGGAACCAGCTTGTTGAGAAGCTACGTAGGTTAAAAAGGAAACACAAGATGACTTTGGACAAAGGCAAAGAGGTTCAGATTTCTTTCAAAATCCCCCAGGAACAAGCCATTTTCGAAATTTCCCACAAGATTTGGGGCAATGACACGGACCATGACGTTTTGGATGTTGATGATTCAAGACCTGTTCCTGAAAGTCCTGATCTTATTGAGAACATTAAGTTGAAGGCGGAAGATGTTGACAATTGTGAAGAAACAGATAAAAGGGCACACAAGCGTGTGAGGTTAACAACAGATGATGTAAACTCAAAAAATTATCAGAGCAATAGCGATGCTACTAGTCTACGGGGCTTCATTGAAGAAACCATGAAGTCTTGTTTCTCACCATTGTTGAAGGAACTGTTGGATGATGTTCCAGTAGAGCCACCCGGTGCGTTGCCCATGTTGTTATCGACAGGGGAAGTGAGGGATGAAAAATGGTTAAAACGGAGGATTTTGGAGCTGGAAGTGTATTTGAATCGGTTGGAATTGTTGCAGGGTCAAATCAAGGCTAGGTTGGAGGAGTTAAAGTCTAGCTTAGATTGA 1128 0.4193 MLSPLVSWILSTSSSSSSSSEEEEEESLDINNDDSDNEKFDNDNVEDQMDNVDDDEKDHFLCPYNVDEDQMDNIPIALAVSDASPVVTVAMAAPADDTNAATNTATTSATTTITTRSKRQYNKKYSDGVKQYQRLWTKQDEIELLKGYLDYIKQQGRANTTIQSGVASFYDQVIPKFSVEFNRNQLVEKLRRLKRKHKMTLDKGKEVQISFKIPQEQAIFEISHKIWGNDTDHDVLDVDDSRPVPESPDLIENIKLKAEDVDNCEETDKRAHKRVRLTTDDVNSKNYQSNSDATSLRGFIEETMKSCFSPLLKELLDDVPVEPPGALPMLLSTGEVRDEKWLKRRILELEVYLNRLELLQGQIKARLEELKSSLD* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2891 375 Pfam Protein of unknown function, DUF573 133 228 IPR007592 GO:0006355
Mtr1g2891 375 PANTHER TRANSCRIPTION FACTOR GEBP FAMILY-RELATED 1 373 - -
Mtr1g2891 375 Coils Coil 353 373 - -
Mtr1g2891 375 MobiDBLite consensus disorder prediction 1 58 - -
Mtr1g2891 375 Coils Coil 183 203 - -
Mtr1g2891 375 MobiDBLite consensus disorder prediction 1 18 - -
Mtr1g2891 375 PANTHER BNAANNG10740D PROTEIN-RELATED 1 373 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2891 Mtr-Chr1 40120068 40121195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2891 93 372 GeBP Transcription Factor Family AT5G28040 33.803 4.23e-44 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Mtr1g2891 DUF573 3.8e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2891 - - gmx:102662842 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3741 7 54354575 54356409 Mtr1g2891 1 40120068 40121195 PCT