Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2886 ATGAATGGAGTGACACACCTTGAAGAAGATGATTCTGAGTTTGTTGAAGTTGATCCAACTGGAAGATATGGCAGATACAATGAAATCCTTGGCAAAGGAGCTTCAAAGACAGTATATAGAGCATTTGATGAGTATCAAGGAATTGAAGTTGCTTGGAATCAGGTCAAGCTGTATGATTTCTTACAAAGTCCTGAAGATCTTGAAAGGCTTTACTGTGAAATTCATCTCTTGAAAACATTGAAACACAAAAACATTATGAAATTTTACACCTCTTGGGTGGATACTGCTAATAGGAATATTAACTTTGTCACTGAAATGTTCACCTCTGGTACACTCAGACAGTATAGGCTGAAGCACAAGAGAGTTAACATAAGAGCAGTGAAGCATTGGTGCATACAGATCCTGAGAGGACTTTTGTATCTACATAGCCATGACCCACCGGTTATCCATAGAGATCTCAAATGTGATAACATTTTTATCAATGGAAATCAAGGAGAAGTCAAAATTGGGGATCTTGGCCTAGCCGCAATTCTTCGTAAATCCCATGCTGCGCATTGTGTCGGAACACCCGAGTTCATGGCGCCTGAAGTATACGAAGAGTCGTATAATGAACTAGTCGACATATATTCCTTTGGGATGTGCATATTAGAGATGGTCACATTTGAATATCCTTATAGTGAATGTACTCATCCGGCTCAAATATACAAGAAAGTTATTTCTGGCAAAAAGCCAGATGCTTTGTATAAAGTTAAAGATCCAGAAGTGCGGCAATTTGTTGATAAATGCTTGGCCACGGTGTCTCTAAGGCTTTCTGCAAAGGAGCTTCTAGATGACCCTTTTCTTCAAATCGATGATTATGAATATGATCTGAGACCTGTAGACAGTGGAGAATTAGGTGACTTTGGTCCCCTCATCAGACAGCCGCTCTATGATCTTCATCGAAGCTATAGTAACTTCAGTAACGAATACTCAAATGGCTTTGGTTATGAAGGGGACTGTTATTATCATCCAGTTGATAACGAACCTTGTGGAATTGAACTTTTTGAGCACCATGATGATGAAGAACCCTCTGAACATGTTGACATAAGTATCAAGGGCAAGAAGAAAGACGACGGTAGCATATTTTTGAGACTGAGGATTTCTGATAAAGAAGGCCGCGTTCGGAATATTTATTTCCCATTCGACATAGAGATGGACACAGCGATAAGTGTGGCGACTGAGATGGTTGCAGAACTTGACATTACCGATCAGGATGTTACCAGTATAGCAGATATGATAGATGGGGAAATTGCTTCCTTGGTACCGGAATGGCAATCTGGACCAGGAATCGTTGAAACTCCCCGTTTTGCAAACCAAGGTTTCTGCCGCAACTGTGTGTCGAATCATACTTCAAGCGGCTCCCTCATGGATTTTCTTTCACACAATCAGGGTAGCCTTCAACTTCCCGAATGTTGTAAGCACGGATGTGCCTCAACGCACGGCCGGTTTGAGGAGATTACTTTCCAATCTGAGGAGTATGACAATCATGTTAGAGAGAATATGAACATAGCAAACATAGCGGATGGCTTGCAGTATCTGGGACTATGGAATCAGCATGAAAGCCGTGAACTGAGTCCGGTAGAGTCTGATGATCAAAGTCATTCTGATGAACAAAATGAACAATTAGATAAATCAATATCAGCTGAAGGTCAAGGACATAATATTTGTGAAAGTAAGTTTCCCCCCAATGCAATAATTTCCCCGAGATATTCATCAGGAACTCGTGATTTTTCCAATATCCGTTCGTTATATTGTGGTCTTGACGGTGATGGTTATGAGAAAGAGATCCAAAAGGAACTGAGATGGCTCAAAGCAAGATACCTAATGGAGTTAAGGGGACTTAAGGATCAACAACTCGGGATAACAGATAAATCTTCTCGTGGCGGTAACGGAGAACACAAAATAGATTATGCCATTATGTTACCTTCGTTGACAGAAACATTCAAAGGAGCCGACAGTGTGATTCGCTTGCAATCTGTCATTAATAACTGGAGCTCTGATTTGAGCAGCCGTCCTTGTGTTCATAAAAGCAGCCCCGATTCAGACGCCAAAATGGCCGAAAATTGTGAGGCGATGGGATCCCCCGGAGAAGGTATGATGGTTACTGCAAAGAGTTTTTACAGTGGCTCGTTGTTTCCGCACTCTCTGCACAGGACAGTTTCACTCCCTGTTGATGCTGTTGATATATAA 2229 0.4145 MNGVTHLEEDDSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCIQILRGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEESYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVISGKKPDALYKVKDPEVRQFVDKCLATVSLRLSAKELLDDPFLQIDDYEYDLRPVDSGELGDFGPLIRQPLYDLHRSYSNFSNEYSNGFGYEGDCYYHPVDNEPCGIELFEHHDDEEPSEHVDISIKGKKKDDGSIFLRLRISDKEGRVRNIYFPFDIEMDTAISVATEMVAELDITDQDVTSIADMIDGEIASLVPEWQSGPGIVETPRFANQGFCRNCVSNHTSSGSLMDFLSHNQGSLQLPECCKHGCASTHGRFEEITFQSEEYDNHVRENMNIANIADGLQYLGLWNQHESRELSPVESDDQSHSDEQNEQLDKSISAEGQGHNICESKFPPNAIISPRYSSGTRDFSNIRSLYCGLDGDGYEKEIQKELRWLKARYLMELRGLKDQQLGITDKSSRGGNGEHKIDYAIMLPSLTETFKGADSVIRLQSVINNWSSDLSSRPCVHKSSPDSDAKMAENCEAMGSPGEGMMVTAKSFYSGSLFPHSLHRTVSLPVDAVDI* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2886 742 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2886 742 MobiDBLite consensus disorder prediction 536 559 - -
Mtr1g2886 742 CDD STKc_WNK 22 281 - -
Mtr1g2886 742 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 1 731 - -
Mtr1g2886 742 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 731 - -
Mtr1g2886 742 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Mtr1g2886 742 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Mtr1g2886 742 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Mtr1g2886 742 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2886 742 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 375 429 IPR024678 GO:0004674|GO:0005524
Mtr1g2886 742 MobiDBLite consensus disorder prediction 536 556 - -
Mtr1g2886 742 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2886 742 Gene3D Phosphorylase Kinase; domain 1 7 105 - -
Mtr1g2886 742 Gene3D - 372 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2886 Mtr-Chr1 40066246 40069895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2886 1 508 MAP Kinase Kinase Kinase AT3G22420 57.971 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mtr1g2886 Pkinase 4.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2886 K08867 - gmx:100272198 1209.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2886 1 40066246 40069895 Mtr1g2886 1 40066246 40069895 ECH
Mtr7g3744 7 54385616 54389019 Mtr1g2886 1 40066246 40069895 PCT