Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2880 ATGGCTGATTCTTCAACAAACCCAAAAGATCACCAAAACACACGTCTCTACCATCCCTACCAACACCTCAACAACGTCCCCATTGACAAACTCTACAACCTCCCCACTTCACCGGAACATCTCTTCCAGGAAGATATTATCAGAAAGCACCGTTCATGGGGAGAAAATGTTCAATACTACACCGGCACCGGTTATCTCTCCGGAGCGATCATCGGTGGAGCCAGAGGAACCGTTCAAGGGTTAAGGGAGGCAGAGGCAGGTGAATCTGTTAAGCTTCGGGTTAACCGTGTTCTTAACTCCGGTGGTCAGGGTGGTCGGAGACTTGGAAACTCGCTTGGTGTGTTGGGGTTGATCTTTGCGGGATTGGAGAGTGGGATGACTTACTTTAGGGATACGGATGATTTGGTTAATAGTGCTGTTGCTGGGCTTGGTACCGGAGCGATTTATAAGGCTGCAGCCGGTCCAAGATCGGCTGCTATTGCTGGTGCTGTTGGTGGAATTGTAGCGGCTGTGGCGGTTGCTGGGAGGCAAGCTTTGAAACGATATGTTCCGATATAA 558 0.5 MADSSTNPKDHQNTRLYHPYQHLNNVPIDKLYNLPTSPEHLFQEDIIRKHRSWGENVQYYTGTGYLSGAIIGGARGTVQGLREAEAGESVKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESGMTYFRDTDDLVNSAVAGLGTGAIYKAAAGPRSAAIAGAVGGIVAAVAVAGRQALKRYVPI* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2880 185 Pfam Tim17/Tim22/Tim23/Pmp24 family 59 168 - -
Mtr1g2880 185 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-3 2 185 - -
Mtr1g2880 185 PANTHER TIM23 2 185 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2880 Mtr-Chr1 40014455 40015462 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2880 1 185 Chloroplast and Mitochondria Gene Families AT3G04800 54.497 4.07e-60 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2880 K17794 - gmx:100779163 278.87