Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2874 ATGGATAGGGTATTCTCAGTGGACGAAATCCCCGACCATCTATGGTCACCGCAGATTCATGTCTCCGGCAGCGCCGGCGATGAATCCTCCAAGATGAGTCGCAGCGCTTCCGAATGGGCGTTCCAACGCTTTTTGCAAGAAGCTGCCTCACCTTCTCCTTCTTCTTCGTCTGTTGCTGATAACACCGGTTTTGCCGATGCTGCAGCAAAAGACGGTGCCGTTTTGCCCAATGGACCACCTCCGGTGGCCGTGGATTCCGATGAATATCGGGCTTTTCTGAAGAGTAAGCTGAATCTCGCCTGTGCTGCCGTTGCCATGACCAGGGGATCTTTGACTAAATCTCAAGACCTAGCCACTTTTCCTGAGAATGGACCACAGTCCTCTAATGCTACTCAAGTTGGATCTCAGCCCATTTCTGAAGGATCTGGTCCTTCTGGAAACGATCCACCTATATTACAAGATAAGGATGCCAAGGTACCACCTGCGGTCCCTTCCATACCACATGTGCAGAAAAAAACCATTGTTGCAATTAGGCCATCAACAAGTGGATCATCAAGAGAACAGTCTGATGATGACGAAGCCGAGGGAGAGACATATATGATTGACAGCACAGACCCTACTGACGTAAAACGAGTAAGGAGGATGCTTTCCAATAGAGAGTCAGCCAGACGCTCAAGAAGAAGAAAGCAGGCTCATTTAACTGAGTTGGAAACACAGGTTTCACAATTAAGAGGTGAAAATTCTACCTTGGTAAAGCGTCTTACTGATGTGAACCAAAAGTACACTGATTCTGCTGTTGACAACAGAGTACTGAAAGCTGATGTTGAAACGTTAAGAGCAAAGGTAAAGATGGCTGAAGAGACTGTGAAAAGAGTTACTGGATTGAACCCATTGTTTCATGTCATGCCTGATATGTCGTCAATGCCAGCATTTGATGGAAGCCCCTCAGACAATTTAGCTGATGCAGCTGTTCCTGTGCAAGACGATCCACATCATCATTTCTATCAACCAACATCTATTAATCCTATGCCGTGTCATGATATGAGAGTCAGCAATGGGTTGGGAGAAATTTCTTCAATTGAAAATGTGCAGCCAAACAATGCAGCAGTTGTAGGTGGGAACAAGATGGGTCAAACAGCTCCTCCGTTGCACCGGGTGGCTAGCTTGGAACATCTTCAGAAGCGGATTCGTGGTGGTGGTGTCGATTCTTGTGGACCTCCTTCTAATGGAGAGCAGTAA 1239 0.4689 MDRVFSVDEIPDHLWSPQIHVSGSAGDESSKMSRSASEWAFQRFLQEAASPSPSSSSVADNTGFADAAAKDGAVLPNGPPPVAVDSDEYRAFLKSKLNLACAAVAMTRGSLTKSQDLATFPENGPQSSNATQVGSQPISEGSGPSGNDPPILQDKDAKVPPAVPSIPHVQKKTIVAIRPSTSGSSREQSDDDEAEGETYMIDSTDPTDVKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSTLVKRLTDVNQKYTDSAVDNRVLKADVETLRAKVKMAEETVKRVTGLNPLFHVMPDMSSMPAFDGSPSDNLADAAVPVQDDPHHHFYQPTSINPMPCHDMRVSNGLGEISSIENVQPNNAAVVGGNKMGQTAPPLHRVASLEHLQKRIRGGGVDSCGPPSNGEQ* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2874 412 Gene3D - 209 264 - -
Mtr1g2874 412 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 213 228 IPR004827 GO:0003700|GO:0006355
Mtr1g2874 412 PANTHER BZIP TRANSCRIPTION FACTOR 1 392 - -
Mtr1g2874 412 PANTHER BASIC LEUCINE ZIPPER 63 1 392 - -
Mtr1g2874 412 SUPERFAMILY Leucine zipper domain 210 261 IPR046347 GO:0003700|GO:0006355
Mtr1g2874 412 SMART brlzneu 206 270 IPR004827 GO:0003700|GO:0006355
Mtr1g2874 412 Pfam bZIP transcription factor 209 261 IPR004827 GO:0003700|GO:0006355
Mtr1g2874 412 Coils Coil 268 288 - -
Mtr1g2874 412 MobiDBLite consensus disorder prediction 116 143 - -
Mtr1g2874 412 CDD bZIP_plant_GBF1 211 261 IPR045314 GO:0003700|GO:0006355
Mtr1g2874 412 Pfam Basic leucine-zipper C terminal 277 399 IPR020983 -
Mtr1g2874 412 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 208 260 IPR004827 GO:0003700|GO:0006355
Mtr1g2874 412 MobiDBLite consensus disorder prediction 116 198 - -
Mtr1g2874 412 Coils Coil 219 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2874 Mtr-Chr1 39894961 39899993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2874 1 299 bZIP Transcription Factor Family AT4G02640 40.854 6.63e-50 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr1g2874 bZIP_C 1.8e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2874 K25784 - gmx:778135 529.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2874 1 39894961 39899993 Mtr1g2874 1 39894961 39899993 ECH
Mtr7g3768 7 54560206 54563118 Mtr1g2874 1 39894961 39899993 PCT