Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2850 ATGCAAACTCATTTGTTTCTCTTCTATTGTTACATTATTGTCTCTCTCATTTTTACTGAGAGAGCTCAAAGTGCAACAAATGATGAATTGTCAACTCTTCTATCCATCAAATCCAGTCTCATTGATTCAATGAATCATCTAAAGGATTGGCAGCCACCGAGCAACGCGACACGGTGGCAAAGTCGGCTCCATTGTAACTGGACTGGAATTGGTTGCAACACTAAAGGCTTTGTAGAGAGTCTTGAACTCTATAATATGAACTTAAGTGGCATTGTTTCAAACCATATTCAATCCCTTTCAAGTTTATCTTACTTCAACATAAGTTGCAACAATTTTGCTTCAACACTTCCTAAATCACTTTCCAACCTCACTTCTCTAAAAAGCTTTGATGTGAGCCAAAACTACTTCACTGGAACCTTTCCGACTGGTTTCGGAAGAGCTGCGGAGTTGAAATCAATCAATGCATCAAGCAATGAATTTTCAGGTCTTCTTCCTGAAGATATCGAAAATGCAACATTGCTCGAAAGCTTTGATTTTCGAGGAAATTACTTTGCAAGTCCAATTCCAAAGAGTTTTAAAAATTTGCAAAAACTTAAATTTCTAGGCCTTTCAGGCAATAACTTCACAGGGAAGATTCCAGAATATCTTGGTGAACTCAGTTCTTTAGAGACATTGATTATGGGATACAATGCATTTGAAGGTGAGATTCCTGCTGAATTTGGCAACATGACAAATCTTCAATATCTTGATTTGGCAGTTGGGACTCTCAGTGGACGAATTCCACCCGAATTAGGTAAGCTCAAGAATCTTACTACAATTTACTTATACCGAAACAAATTCACTGCGAAAATTCCGCCTCAACTTGGCAACATTATGTCACTAGCATTTCTAGACCTCTCTGATAATCAGATCACAGGAGAAATACCAGAAGAGCTTGCTAAATTGGAAAACTTACAGCTTTTGAATTTGATGAGCAATAAACTAACTGGTCCTGTACCAAAGAAGCTTGGTGAACTGAAAAAGTTACAGGTTCTTGAGTTATGGAAAAATTCTTTAGAAGGTTCTTTGCCAATGAACCTTGGAAGGAATTCTCCTTTGCAGTGGTTAGATGTGTCCTCTAACTCATTGTCAGGTGAGATCCCTCCAGGTTTGTGTACAACAGGCAATCTAACTAAATTAATACTCTTCAACAATTCGTTCTCCGGTCCAATTCCGAGTGGACTTTCGAACTGTTCATCGTTGGTGCGTGTTCGGATTCAAAACAATCTTATTTCCGGAACTATTCCGGTTGGATTTGGCAGCCTTCTGAGCCTTCAACGGCTGGAGTTGGCGAAGAACAACTTCACTGGTCAAATTCCTATAGATATCACCTCTTCCACATCACTTTCCTTCATTGATGTATCTTGGAACCACCTTGAGTCATCTCTACCTTCAGAAATTCTTTCTATTCCAACCCTTCAAACCTTCATTGCCTCTCACAACAATCTTGGAGGAACTATACCTGATGAGTTCCAAGGATGTCCATCTCTCTCTGTGCTTGATCTTTCAAATGCATATATCTCCAGCCCAATCCCAAAAGGTATAGCTTCTTGTCAAAAACTAGTCAACCTTAACCTTAGAAACAATCATTTGACAGGTGAAATACCAAAATCAATCACAAACATGCCTACCTTATCAGTTCTTGATCTGTCCAACAATTCACTGACCGGTCGGATACCCGAAAACTTCGGAAGCTCGCCGGCTCTTGAAACAATGAACTTGTCCTATAACAAACTGGAAGGGCCAGTACCCTCGAATGGAATTCTACTGACCATGAATCCTAACGATTTTGTCGGCAATGCTGGTCTTTGTGGTAGTATTCTCCCTCCATGTTCTCAGAGTTCAACCGTGACAAGTCAGAAAAGGAGCTCACACATTAGTCACATTGTTATTGGTTTTGTGACCGGCATTTCGGTCATTTTATCCCTTGCTGCTGTATATTTTGGAGGGAAATGGTTGTACAATAAATGTTATATGTATAACAGTTTCATCTATGATTGGTTCAAACATAACAATGAAGATTGGCCTTGGAGGTTAGTAGCTTTTCAAAGGATCAGTTTCACAAGTAGTGAGATCCTAACTTGCATAAAAGAATCAAATGTCATAGGCATGGGTGGTGCTGGCATTGTTTACAAAGCTGAAATCCATAAACCTCAGATAACAGTAGCAGTGAAGAAACTATGGAGGTCAAGCCCAGATATAGAAAATGGGAATGATGTGTTAAGAGAAGTGGAACTCTTGGGGAGACTAAGGCATAGGAATATTGTAAGGCTATTAGGGTATGTTCACAATGAAAGGGATGTGATAATGGTTTATGAGTACATGATTAATGGGAACCTTGGAACAGCACTGCATGGTGAACAATCTGCAAGGTTGCTTGTAGATTGGGTCTCAAGGTATAACATAGCTCTTGGAGTTGCACAAGGGATGAACTACCTACACCATGATTGTCATCCACCAGTTATTCACAGGGATATCAAGTCTAATAACATACTCCTTGACGCAAATTTGGAGGCAAGGATAGCAGATTTCGGTTTGGCGAGGATGATGATTCAAAAGAATGAGACTGTTACAATGGTGGCTGGATCTTACGGTTATATTGCACCAGAATATGGATACACTCTGAAGGTTGATGAGAAGATTGACATATACAGTTATGGAGTGGTACTTTTGGAGCTGCTAACTGGTAAAATGCCATTAGACCATACTTTTGAAGAAGCCGTAGACATAGTCGAATGGATACAAAAGAAGAGAAACAATAAAGCCATGTTAGAAGCACTAGATCCCACCATAGCTGGTCAGTGCAAACATGTTCAGGAAGAGATGCTTCTTGTCCTGCGGATTGCACTTCTATGCACTGCAAAGCTCCCCAAGGAAAGACCATCCATGAGAGACATCATCACAATGCTTGGAGAGGCGAAGCCAAGAAGGAAAAGCATTTGTGGCAATGGAAGGCAAGAGAGTAGCATTGAAAAAGGAACAATCTTTACCACATCCCCAGTAGCAAGTCTTTTGTAG 3057 0.4014 MQTHLFLFYCYIIVSLIFTERAQSATNDELSTLLSIKSSLIDSMNHLKDWQPPSNATRWQSRLHCNWTGIGCNTKGFVESLELYNMNLSGIVSNHIQSLSSLSYFNISCNNFASTLPKSLSNLTSLKSFDVSQNYFTGTFPTGFGRAAELKSINASSNEFSGLLPEDIENATLLESFDFRGNYFASPIPKSFKNLQKLKFLGLSGNNFTGKIPEYLGELSSLETLIMGYNAFEGEIPAEFGNMTNLQYLDLAVGTLSGRIPPELGKLKNLTTIYLYRNKFTAKIPPQLGNIMSLAFLDLSDNQITGEIPEELAKLENLQLLNLMSNKLTGPVPKKLGELKKLQVLELWKNSLEGSLPMNLGRNSPLQWLDVSSNSLSGEIPPGLCTTGNLTKLILFNNSFSGPIPSGLSNCSSLVRVRIQNNLISGTIPVGFGSLLSLQRLELAKNNFTGQIPIDITSSTSLSFIDVSWNHLESSLPSEILSIPTLQTFIASHNNLGGTIPDEFQGCPSLSVLDLSNAYISSPIPKGIASCQKLVNLNLRNNHLTGEIPKSITNMPTLSVLDLSNNSLTGRIPENFGSSPALETMNLSYNKLEGPVPSNGILLTMNPNDFVGNAGLCGSILPPCSQSSTVTSQKRSSHISHIVIGFVTGISVILSLAAVYFGGKWLYNKCYMYNSFIYDWFKHNNEDWPWRLVAFQRISFTSSEILTCIKESNVIGMGGAGIVYKAEIHKPQITVAVKKLWRSSPDIENGNDVLREVELLGRLRHRNIVRLLGYVHNERDVIMVYEYMINGNLGTALHGEQSARLLVDWVSRYNIALGVAQGMNYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLARMMIQKNETVTMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGKMPLDHTFEEAVDIVEWIQKKRNNKAMLEALDPTIAGQCKHVQEEMLLVLRIALLCTAKLPKERPSMRDIITMLGEAKPRRKSICGNGRQESSIEKGTIFTTSPVASLL* 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2850 1018 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXL1 6 1000 - -
Mtr1g2850 1018 Gene3D Ribonuclease Inhibitor 25 183 IPR032675 -
Mtr1g2850 1018 SUPERFAMILY L domain-like 61 357 - -
Mtr1g2850 1018 Pfam Leucine Rich repeat 292 308 IPR001611 GO:0005515
Mtr1g2850 1018 SMART serkin_6 709 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2850 1018 Gene3D Ribonuclease Inhibitor 184 251 IPR032675 -
Mtr1g2850 1018 SUPERFAMILY Protein kinase-like (PK-like) 703 983 IPR011009 -
Mtr1g2850 1018 Gene3D Transferase(Phosphotransferase) domain 1 792 1004 - -
Mtr1g2850 1018 ProSiteProfiles Leucine-rich repeat profile. 293 316 IPR001611 GO:0005515
Mtr1g2850 1018 PANTHER UNNAMED PRODUCT 6 1000 - -
Mtr1g2850 1018 Pfam Leucine rich repeat N-terminal domain 27 73 IPR013210 -
Mtr1g2850 1018 Gene3D Phosphorylase Kinase; domain 1 708 791 - -
Mtr1g2850 1018 Pfam Protein kinase domain 711 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2850 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672|GO:0006468
Mtr1g2850 1018 PRINTS Leucine-rich repeat signature 294 307 - -
Mtr1g2850 1018 PRINTS Leucine-rich repeat signature 555 568 - -
Mtr1g2850 1018 Gene3D Ribonuclease Inhibitor 363 628 IPR032675 -
Mtr1g2850 1018 ProSiteProfiles Protein kinase domain profile. 709 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2850 1018 Pfam Leucine rich repeat 533 592 IPR001611 GO:0005515
Mtr1g2850 1018 Gene3D Ribonuclease Inhibitor 252 361 IPR032675 -
Mtr1g2850 1018 SMART LRR_typ_2 555 579 IPR003591 -
Mtr1g2850 1018 SMART LRR_typ_2 195 219 IPR003591 -
Mtr1g2850 1018 SMART LRR_typ_2 435 459 IPR003591 -
Mtr1g2850 1018 SMART LRR_typ_2 99 123 IPR003591 -
Mtr1g2850 1018 SMART LRR_typ_2 267 291 IPR003591 -
Mtr1g2850 1018 SMART LRR_typ_2 339 363 IPR003591 -
Mtr1g2850 1018 SUPERFAMILY RNI-like 258 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2850 Mtr-Chr1 39668117 39671418 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2850 4 1018 Receptor kinase-like Gene Family AT1G08590 61.568 0.0 1259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr1g2850 Pkinase 2.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2850 - - gmx:100793873 1669.83