Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2818 ATGAAAACTCTTATTCTGTTGTTACTGCTTTTTAATCTTACTCTTTATGCTTCTGCTACTGATTCTGATGAATATGATCATTGTAACTGTGATGATGAAGAAGCACTTTTCAGCATACATACAATCCTTGTTGGTCAAAAAGTCAGTGATTTTTTCATTGCAATTGCATATTTTTCAATACCAATTGAGCTTCTTTACTTTGTTAGTCGTTCAAATGTTCCTTTCAAATTGTTGTTTCTTCAATTCATAGCCTTCATAGTTCTATGTGGTATGACTCATTTACTCAATGCTTATTCTTATCATAGTCATCCTTCTTTTCAACTCTTGCTTTCCCTTACCGTTGCTAAATTCCTCACTGCTCTTGTGTCGTGTGCAACGGCATTGACCCTTCCGCCGTTGATCCCTCTCCTTCTTAGAATTAAGGTGAGGGAGATTTTCTTGAGGCAGAATGTGATGGAATTGGGGCAAGAAGTTGGGATTATGAAGAAACAAAAGGAAGCTAGTTGGCATGTTAGGATGCTTACTAGGGAAATTAGGAAGTCTCTTGATAAACATACAATTTTGTATACTACTCTTGTTGAGCTTTCTAAGGCTTTGGATTTGCATAATTGTGCTGTTTGGATGCCGAATGATGATAGGAGAGAGATGTATTTGACTCATGAATTGAAATCGGATTCTGTTAAGAGTTTTCATCATAATTCTATTCCTGTGATTGACCCTGATGTGTTGGAGATAAGGAAAACTAAAGGGGTTAGGATTTTGAGGCCCGAATCTAAACTAGGAGCTGCTAGTAGTGGTGGTGGTAGTACTGAGGAGTTGGGCGCTGTCGCGGCTATTCGTATGCCGATGCTTCATGTTTCGAATTTCAAAGGAGGGACGCCGGAGTTGGTTGATACATGTTATGCTATACTGGTTTTGGTTCTTCCAGGTTCGAACTCTAGGGTTTGGACCGCTCCAGAGATGGAGATAGTTGAGGTGGTGGCTGATCAGGTGGCCGTAGCCCTTTCTCATGCATCGGTTCTCGAAGAGTCTCATTTAATGAGAGAGAAACTCGAAGAGCAAAACCGAGCATTGCAACAGTCTCAAAAGAACGCGATGATGGCCAGCCAGGCTAGGAAGTCATTCCAAACAGTGATGAGCCATGGACTGAGGAGGCCAATGCATTCAGTTGTGGGGATGCTTTCATTGTTTCAAGAGGGTAATATGAGGCCTGAACAAAAGATTATTGGTGACACAATGTTGAAAGTCGGCAACGTGCTCTCGAGTTTAGTAAACGATGTAATGGATATTTCTGAAAATAAAAAGGGTGGCCTTCAGTTAGAGATGAAACCTTTCCTTCTACATTCCATGTTGAGGGAAGCCGCTTGCATTGCTAAGTGCTTGTGTGTGTATCAAGGGTTTGGTTTTCAGATTGATGTTGAAAAGTCTTTGCCTGAAAAAGTTTTAGGCGACGAAGCAAGGACTTTTCAAGTAATTATGCATATTGTTGGCTACTTGTTGAACACGCGTGACCGAGGGAATCTTGTTTTTCGGGTTTTTGTTACAAGTGAGAGTGGTGATAAGGACGACAAAAAATTTGGTGTTTGGAGATCGAGCAGCCCAGTTGAGTATGTAGACATAAAATTTGATTTTCAGATTACTGGTAGTTCTCAGTCAGATGAACCGATTTCAACAAAACAACAGATTGGTAGGAGGCTGAATCACAACAGTGAATCTAAGGAGGGCTTGAGCTTCAATATGTGCAGGAGGTTGGTACAGATAATGCAAGGTAATATATGGATATTACCAAACTCTCAGGGTTTGGTGCAAGGCGTGTCACTTCTTCTAAAGTTTCAGATAGGACCCTCGCTTGAAAGATACATGTTTGCACCTAAAGATTATTCAAATTCACAGTTTGGAGGCCTCAAGATTTTGTTAGCAGATGATGATGGTTTAAACAGGATCGTGACAAAGAAGCTACTCGAGAGGCTGGGGTGTCTAGTAACAGCAGTTTCATCAGGGTTTGAGTGCCTGGGTGCTATAAGTGGTTCTGGTAGCAACTCATTCAAAATTATCATGTTAGACATTCACATGCCTGAAATGGACGGTTTTGAAGTGGCGGCAAGGATCAGGAAGTTCAATGGCCCTAATTGGCCTTTGATCATAGCTCTTATAGCTAATGCAGAAGAGCAAGTTAAAGATAGATGCATGCTGGCGGGAATGAATGGTGTGATCCGGAAACCAATACTCCTTCATCAGATAGCGGATGAACTTAGATCGGTCCTACTTCGTGCAGGTGAAAAACTGTGA 2289 0.4128 MKTLILLLLLFNLTLYASATDSDEYDHCNCDDEEALFSIHTILVGQKVSDFFIAIAYFSIPIELLYFVSRSNVPFKLLFLQFIAFIVLCGMTHLLNAYSYHSHPSFQLLLSLTVAKFLTALVSCATALTLPPLIPLLLRIKVREIFLRQNVMELGQEVGIMKKQKEASWHVRMLTREIRKSLDKHTILYTTLVELSKALDLHNCAVWMPNDDRREMYLTHELKSDSVKSFHHNSIPVIDPDVLEIRKTKGVRILRPESKLGAASSGGGSTEELGAVAAIRMPMLHVSNFKGGTPELVDTCYAILVLVLPGSNSRVWTAPEMEIVEVVADQVAVALSHASVLEESHLMREKLEEQNRALQQSQKNAMMASQARKSFQTVMSHGLRRPMHSVVGMLSLFQEGNMRPEQKIIGDTMLKVGNVLSSLVNDVMDISENKKGGLQLEMKPFLLHSMLREAACIAKCLCVYQGFGFQIDVEKSLPEKVLGDEARTFQVIMHIVGYLLNTRDRGNLVFRVFVTSESGDKDDKKFGVWRSSSPVEYVDIKFDFQITGSSQSDEPISTKQQIGRRLNHNSESKEGLSFNMCRRLVQIMQGNIWILPNSQGLVQGVSLLLKFQIGPSLERYMFAPKDYSNSQFGGLKILLADDDGLNRIVTKKLLERLGCLVTAVSSGFECLGAISGSGSNSFKIIMLDIHMPEMDGFEVAARIRKFNGPNWPLIIALIANAEEQVKDRCMLAGMNGVIRKPILLHQIADELRSVLLRAGEKL* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2818 762 SUPERFAMILY CheY-like 632 755 IPR011006 -
Mtr1g2818 762 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 356 435 IPR036097 GO:0000155|GO:0007165
Mtr1g2818 762 Gene3D - 435 613 IPR036890 -
Mtr1g2818 762 CDD HATPase_ETR2_ERS2-EIN4-like 477 609 - -
Mtr1g2818 762 PIRSF Ethylen_sen_hybr_HK 1 762 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Mtr1g2818 762 CDD REC_ETR-like 635 751 - -
Mtr1g2818 762 CDD HisKA 369 431 IPR003661 GO:0000155|GO:0007165
Mtr1g2818 762 ProSiteProfiles Histidine kinase domain profile. 378 615 IPR005467 -
Mtr1g2818 762 SMART HisKA_10 371 436 IPR003661 GO:0000155|GO:0007165
Mtr1g2818 762 SUPERFAMILY GAF domain-like 186 338 - -
Mtr1g2818 762 Gene3D - 167 335 IPR029016 -
Mtr1g2818 762 Gene3D - 336 433 - -
Mtr1g2818 762 Pfam GAF domain 185 335 IPR003018 GO:0005515
Mtr1g2818 762 Pfam Response regulator receiver domain 637 749 IPR001789 GO:0000160
Mtr1g2818 762 SMART REC_2 635 751 IPR001789 GO:0000160
Mtr1g2818 762 Gene3D - 635 761 - -
Mtr1g2818 762 PANTHER TWO-COMPONENT HISTIDINE KINASE 3 755 - -
Mtr1g2818 762 ProSiteProfiles Response regulatory domain profile. 636 755 IPR001789 GO:0000160
Mtr1g2818 762 Coils Coil 341 371 - -
Mtr1g2818 762 PANTHER ETHYLENE RECEPTOR 3 755 - -
Mtr1g2818 762 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 440 597 IPR036890 -
Mtr1g2818 762 SMART gaf_1 183 345 IPR003018 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2818 Mtr-Chr1 39336946 39341292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2818 23 760 Miscellaneous Gene Families AT3G04580 59.813 0.0 872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr1g2818 GAF 7.5e-11 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2818 K14509 - gmx:100101892 1177.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2818 1 39336946 39341292 Mtr7g3815 7 54996041 54999763 ECH
Mtr1g2818 1 39336946 39341292 Mtr1g2818 1 39336946 39341292 ECH