Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2813 ATGGCTTCTCTATCTTGCTCAGCCACAGACTTCGCTCCACTCCTCACCACCGCTGCAAACGCTACCGCTGTAGCTGACTACCTATGCACCCAATTCAACACCATCTCAAATAAACTCAGCGACACCACTTATGCAATAGACAACACCTACCTTCTCTTCTCAGCTTATTTAGTCTTTGCCATGCAGCTTGGTTTCGCTATGCTCTGCGCTGGCTCCGTTCGAGCCAAAAACACTATGAACATCATGCTCACCAATGTCCTTGACGCTGCAGCCGGTGGCCTCTCCTACTATCTCTTCGGCTTTGCTTTCGCCTTTGGAGCACCCTCCAACGGCTTCATTGGCCGCCACTTTTTCGGTCTAAGGGATTATCCTTCACCTTCCGGTGACTACAGCTTCTTCCTCTACCAGTGGGCCTTCGCCATCGCTGCTGCCGGTATCACCAGCGGCTCCATTGCAGAGAGAACTCAATTTGTCGCCTATCTCATATATTCTTCTTTCTTAACCGGTTTTGTTTATCCCATCGTTTCGCATTGGGTTTGGTCCGCTGATGGTTGGGCCAGCCCAACACGAACCGACGGTGATGTTTTATTTGGGTCTGGTGTAATCGACTTTGCCGGTTCAGGTGTGGTTCACATGGTGGGTGGTATAGCAGGGTTATGGGGAGCATTTATAGAAGGTCCTAGAATAGGGAGGTTCGACCGGACGGGCCGGTCTGTTGCATTAAAAGGACATAGCGCGTCGTTGGTGGTGTTGGGTTCTTTTTTATTATGGTTCGGTTGGTACGGGTTCAACCCCGGTTCATTTTTAACAATTGTAAAAAGCTATGGAAATATGAGTAACAAAAGGAATTATTATGGTCAATGGAGTGCTATTGGAAGAACAGGTGTCACAACGACATTGGCTGGATGCACTGCAGCTTTAACAACTTTGTTTAGTAAACGGTTATTAGTTGGACACTGGAATGTGACTGACGTGTGTAACGGTTTACTTGGCGGTTTTGCTGCTATAACTGCGGGTTGTTCTGTTGTGGAACCATGGGCCGCGATTGTGTGTGGGTTTGTTGCTGCGTGGGTTTTGATTGGGCTTAATAAATTGGCGATTAAGGTGAAGTATGATGATCCATTAGAGGCTGCGCAATTACACGGAGGGTGTGGCGCATGGGGGGTGTTGTTTACGGGATTGTTTGCAAAGGGGGAGTATGTTGATGAGATTTATGGAGTTGGGAGGCCGTATGGATTGTTGATGGGTGGTGGTGGGAGGTTGTTTGCAGCGCAGGTGGTTGAGGTGTTGGTTATTTGTGGGTGGGTTACGGTCACAATGGTGCCGTTATTTTATGGGCTGAATAAGATGAAATTGTTAAGGATATCGAGGGATGATGAGACTGCGGGGATGGACTTGACTAGACATGGTGGGTTTGCTTATGCGTATCATGATGAGGAAGATGACGAATCTATTAGGAAATTAGGGTTTATGATGGGTAGGATTGAGCCTGCCACGAGTGTGTCTCCCTCTGCCATCGGACACGATACACCGGTGGCAACAAGTGCACCTCCAGTGTGA 1560 0.4833 MASLSCSATDFAPLLTTAANATAVADYLCTQFNTISNKLSDTTYAIDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNGFIGRHFFGLRDYPSPSGDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWVWSADGWASPTRTDGDVLFGSGVIDFAGSGVVHMVGGIAGLWGAFIEGPRIGRFDRTGRSVALKGHSASLVVLGSFLLWFGWYGFNPGSFLTIVKSYGNMSNKRNYYGQWSAIGRTGVTTTLAGCTAALTTLFSKRLLVGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAWVLIGLNKLAIKVKYDDPLEAAQLHGGCGAWGVLFTGLFAKGEYVDEIYGVGRPYGLLMGGGGRLFAAQVVEVLVICGWVTVTMVPLFYGLNKMKLLRISRDDETAGMDLTRHGGFAYAYHDEEDDESIRKLGFMMGRIEPATSVSPSAIGHDTPVATSAPPV* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2813 519 SUPERFAMILY Ammonium transporter 44 455 - -
Mtr1g2813 519 PANTHER AMMONIUM TRANSPORTER 1 508 - -
Mtr1g2813 519 Gene3D Ammonium transporter AmtB like domains 25 491 IPR029020 -
Mtr1g2813 519 Pfam Ammonium Transporter Family 50 474 IPR024041 GO:0008519|GO:0016020|GO:0072488
Mtr1g2813 519 TIGRFAM amt: ammonium transporter 47 474 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mtr1g2813 519 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Mtr1g2813 519 PANTHER AMMONIUM TRANSPORTER 1 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2813 Mtr-Chr1 39301842 39303851 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2813 2 502 Inorganic Solute Cotransporters AT1G64780 77.515 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2813 K03320 K07573 gmx:100797209 828.55