LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr1g2784	ATGGAGCCTAACTTTAATGTTTCGCTTCCATTAGTGTTCCTAATTATCACTCCTTTTCTTTTACTCCCTCTCCATGCCAAAGATGAAACTTCCTCCACCTACATAGTCCACATGGACAAATCTCTCATGCCTCAAGTTTTCACAAGCCATCATAATTGGTATGAATCCACCCTTCATTCCACAACAACACAAAGTGATGATCATGTTCATCCATCAAAGAAATTGGTGTACACCTACAATCATGCCATGCATGGATTCAGTGCAGTCTTATCACCAAAAGAGTTAGACAACCTCAAAAAATCTCATGGTTTTGTCACAGCTTACCCTGACAGAACAGCAACAATAGACACAACACACACCTTTGAGTTTCTTTCATTAGACCCTTCCAAAGGACTATGGAATGCATCAAATTTAGGAGAAAATGTTATTGTTGGTGTTATTGACAGTGGTGTTTGGCCTGAAAGTGAAAGCTTTAAAGACGATGGCATGTCGAAAAACATCCCAACAAAATGGAAAGGAAAATGTCAAGCAGGACAAGATTTCAACACTTCTATGTGTAACTTGAAATTAATTGGAGCTAGATATTTCAACAAAGGTGTGATTGCATCAAAACCAAATGTCAAAATCAGTATGAACTCAGCTAGAGACACACAAGGACATGGTAGTCACACATCATCAACGGCAGCCGGAAACTATGTCAAAGATGCATCTTTCTTTGGTTATGCAAAAGGTGTAGCTAGAGGTATTGCACCAAAAGCTAGAATTGCAATGTATAAAGTACTTTGGGACGAAGGTCGTCTAGCTTCTGATGTTCTTGCAGGAATGGATCAAGCTATTGATGATAATGTTGATGTTATCTCAATCTCATTAGGTTTTAATAGTGTTCCACTTTATGAAGATCCAGTTGCAATAGCTTCATTTGCAGCAATGGAAAAAAATGTGGTTGTTTCATCTTCTGCTGGAAATGAAGGTCCACATCTTAGTACTTTACACAATGGAATCCCTTGGGTTATAACCGTTGCGGCTGGTACAATCGATCGCACGTTTGGTAGTTTGAAACTGGGAAGTGGTGAAACTATTGTTGGTTGGACTTTGTTTCCTGCTACTAATGCTATAGTTGAAAATCTTCAACTTGTTTACAACAAAACTTTATCATCGTGCGATTCATATAGTCTTTTAAGTGGAGCTGCAACAAGAGGGATTATTGTTTGTGATGAATTGGAATCAGTTTCAGTTCTTAGCCAAATCAATTATGTTAATTGGGCAGGTGTAGTTGGTGCTGTTTTTATCTCAGAAGATCCAAAACTGCTTGAAACAGGAACAGTTTTTTCTCCAAGTATTGTTATTAGTCCAAAAGATAAAAAAGCACTTATCAAGTACATAAAAAGTGTTAAATTTCCAACTGCTAGCATCAATTTTCGACAAACATTCGTTGGAACAAAGCCAGCACCAGCTGCTGCTTATTACAGTTCAAGAGGTCCTTCAAAAAGCTATCCAAGAATCTTAAAGCCTGACATTATGGCACCTGGTTCTTATGTTCTAGCTGCTTTTGCTCCGACTATATCATCAGCTAGAATCGGAACAAACATTTTTTTATCGAATAATTACAATTTACTTTCAGGTACATCAATGTCATGTCCTCATGTATCAGGCGTTGCGGCTTTGTTAAAGGCCGCAAAGCCTGATTGGAGTTCGGCTGCTATAAGATCAGCAATAGTTACAACAGCTAATCCATTTGATAACATGCAAAATCCGATTATGGACAATGGTAATCCATCTCAATTCGCTTCGCCTCTTGCTATGGGAGCTGGTCAGATTGATCCTAACAAAGCATTGGATCCTGGTTTAATATATGATGCTACACCACAAGACTATGTTAATCTCCTTTGTGATTTTGGTTATACGCATAGTCAAACCTTGACTATTACAAGATCGAAAAAATATAATTGCGATAACCCTTCGTCCGATCTTAATTATCCTTCTTTTATTGCTTTATATGCTAACAAAACAAGGTCAATTGAGCAGAAGTTTGTGAGGACTGTGACAAATGTTGGAGATGGTGCTGCTAGTTACAATGTGAAGGTGACAAAACCAAAGGGTTGTGTTGTTACTGTGGTTCCTGAGAAGCTAGAATTTAGTGTTAAGAATGAGAAACAAAGTTACTCTCTTGTTGTAAAGTATAAGAGGAAGAATAAGAAGGAATTAAATGTGTTATTTGGTGACATTGTTTGGGTTGAACAAGGTGGTGGTGCACATAATGTTAGGAGTCCTATTGTAGTGGCACCAAGTGCTTTTGTATGA	2301	0.379	MEPNFNVSLPLVFLIITPFLLLPLHAKDETSSTYIVHMDKSLMPQVFTSHHNWYESTLHSTTTQSDDHVHPSKKLVYTYNHAMHGFSAVLSPKELDNLKKSHGFVTAYPDRTATIDTTHTFEFLSLDPSKGLWNASNLGENVIVGVIDSGVWPESESFKDDGMSKNIPTKWKGKCQAGQDFNTSMCNLKLIGARYFNKGVIASKPNVKISMNSARDTQGHGSHTSSTAAGNYVKDASFFGYAKGVARGIAPKARIAMYKVLWDEGRLASDVLAGMDQAIDDNVDVISISLGFNSVPLYEDPVAIASFAAMEKNVVVSSSAGNEGPHLSTLHNGIPWVITVAAGTIDRTFGSLKLGSGETIVGWTLFPATNAIVENLQLVYNKTLSSCDSYSLLSGAATRGIIVCDELESVSVLSQINYVNWAGVVGAVFISEDPKLLETGTVFSPSIVISPKDKKALIKYIKSVKFPTASINFRQTFVGTKPAPAAAYYSSRGPSKSYPRILKPDIMAPGSYVLAAFAPTISSARIGTNIFLSNNYNLLSGTSMSCPHVSGVAALLKAAKPDWSSAAIRSAIVTTANPFDNMQNPIMDNGNPSQFASPLAMGAGQIDPNKALDPGLIYDATPQDYVNLLCDFGYTHSQTLTITRSKKYNCDNPSSDLNYPSFIALYANKTRSIEQKFVRTVTNVGDGAASYNVKVTKPKGCVVTVVPEKLEFSVKNEKQSYSLVVKYKRKNKKELNVLFGDIVWVEQGGGAHNVRSPIVVAPSAFV*	767

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr1g2784	766	Gene3D	-	629	762	-	-
	Mtr1g2784	766	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	33	761	IPR045051	-
	Mtr1g2784	766	ProSitePatterns	Serine proteases, subtilase family, serine active site.	541	551	IPR023828	-
	Mtr1g2784	766	Gene3D	-	346	479	-	-
	Mtr1g2784	766	Gene3D	Peptidase S8/S53 domain	141	625	IPR036852	GO:0004252\|GO:0006508
	Mtr1g2784	766	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	23	115	IPR037045	-
	Mtr1g2784	766	CDD	PA_subtilisin_like	351	471	-	-
	Mtr1g2784	766	CDD	Peptidases_S8_3	114	577	IPR034197	-
	Mtr1g2784	766	Pfam	Fibronectin type-III domain	656	760	IPR041469	-
	Mtr1g2784	766	Pfam	Peptidase inhibitor I9	33	113	IPR010259	-
	Mtr1g2784	766	SUPERFAMILY	Subtilisin-like	116	616	IPR036852	GO:0004252\|GO:0006508
	Mtr1g2784	766	Pfam	Subtilase family	139	580	IPR000209	GO:0006508\|GO:0008236
	Mtr1g2784	766	PANTHER	OS01G0868800 PROTEIN	33	761	-	-
	Mtr1g2784	766	PRINTS	Subtilisin serine protease family (S8) signature	139	158	IPR015500	-
	Mtr1g2784	766	PRINTS	Subtilisin serine protease family (S8) signature	216	229	IPR015500	-
	Mtr1g2784	766	PRINTS	Subtilisin serine protease family (S8) signature	540	556	IPR015500	-
	Mtr1g2784	766	ProSiteProfiles	Serine proteases, subtilase domain profile.	120	612	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr1g2784	Mtr-Chr1	39050325	39052757	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr1g2784	7	759	Subtilisin-like Serine Gene Family	AT5G67090	40.880	0.0	537

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr1g2784	-		-	gmx:100806072	1131.32