Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2783 ATGGCTGAATCGCTCCTCTTCGGCCTTGCAGAGTCGTTCATTGTGAAACTAGCTTCTAGTGCTGTTAAACAAGCTTCTCTTGCGCTTGGCGTCTACCAAGATTTGCAAGAAATCAGAGACACCATTTCATTCATCAAAGCAGTGCTGCTGGATGCTGAGAAAAAGCAGCATCAAAACCAGGAGCTTCGTGAATGGATGAGACAGATTAAGCGCATCTTCTCCAAAGCCGAAGACATTATCGACGATTTTGAGTGCGAGGCACTGCAGAAACAAGTCGTCAACACTTCCGGCAGTAGGAGAAAGAAGGTACGGCGTTTCTTATCAAGTTCTAATCCTATTGTTTACCGCCTTAAAATTGCGCATCGTATCCAACATATCAAAGAGAGCTTGAATAAGGTTGCAGAAATTAGAGATAAATTTGGCCTTCACATCAAAGAGAGTGATGATCGTGTTGTGCAAAGACGGGAAACTCATTCTCATGTAAATGATTCTGATGTGATAGGAAGGGAACAAGATAAACAGAAAATTGTAGAACTCTTATTCGACGATAGTGATGATAAAAATCTATCTGTTGTTGCTATTGTGGGACTTGGAGGTATGGGAAAGACTACACTTGCAAAAGTTGTGTTTAATGATAAGAGTGTAGTTGACTCTTTTCCATTAAAGATGTGGATATGCGTCTCGGATGATTTTGATGTTAAGAATCTGCTTGTTAAGATTATTGGATCTGCTCCTGACCAAAATCACCAGGAGAACATTAAAAACTTTAGTTTGGAGCAACTGAAAAATCGTCTTAGAGACATACTTGCTGGTCAAAAGTTCTTACTTGTTTTGGACGATGTGTGGAATGAGGATCGTGTCAAATGGGAAGAATTTAGGGGTTTAATACCAGCAGGTGCTCAAGGAAGTAAAGTACTAGTGACTTCACGTAGCGACACGGTAGCTAACATGATGGGCACTTACACTTCTTACAATTTGCAAGGGCTTTCTAAAGAGGACTCATTGTCTGTATTTGTAAAATGGGCTTTTAAAGAGGGAGAAGAGAGTAAACATCCTGAACTAATGGAGATTGGAAAAGATATTGTGCTTAAATGTGGAGGGCTTCCATTGGCCCTAAGGACATTGGGGAGTTCGCTGTTCTTAAAAGTTGATATACAAGAGTGGAAGTTTGTTAGGGACAATGAGATTTGGAATTTACCGCAAAAAGACGAGGACATTTTACCAGCAATCAAATTAAGTTATGATCAATTACCTTCTTATTTAAAACAGTGTTTTGCTTGCTTCTCCCTCTTTGAAAAAGACTTCCATTTCAACAGTTTTCATACAATTGTACTCTGGGAGGCACTTGGTTTTCTTCAATCACCAAACAAGGGTGACACTTTGAAAGATATTGGCAACAAGTTTTTAAAAGAGCTACGGTCAAGATCTTTTCTTCAAGATTTTATTGACTATGGTTATGCTTGCAAATTCAAATTGCACGATCTAGTGCATGACCTTGCATTGTATGTTTCAAGAGACGAGTTTCAATTGTTGAACTCCCATAGTGACAATATATCTGAAAATGCCTTACATTTGTCATTTACTAAAAATTATTTGTTTGGAAAAACTCCACTTCCCAGAGGTTTGAGAACCATACTTTTCCCAGTCGGAGTCAACAACGAAGCTTTCTTGAATACTTTGGTATCAAGGTGCACATGCTTGCGGGTTTTGCAAATAAATAATTCTGGATATGAGAGCTTGCCTAGCTCCATTGGTAAATTAAAACACTTGAGATATCTCAATCTTGAAGATAATGAAAAACTCAAGAGCGTCCCTGATTCAGTGTGCAAACTCCAAAATTTAATAAATTTGGACCTCAGTGGATGCATAAAGCTACAAGAATTGCCCAATGGAATAGGAAACTTAATCAGTCTACAACAACTACATATAACCACATTGCAATCTAAATTTCCAGACAATGAGATTGCAAAATTGACTTTTCTAGAAATATTAACGCTTGTTGATTGTGACAACTTGGAGTCATTGTTTGAAGGAATAGAAGAACTTCCGAGTCTTAAATTTTTGGATATTTATTCTTGTAAGAGTCTAAGGTCAGTGCCTCTTCATGTCATTCCAAACTTAGAGAGTTTGTCTATTGGTAACTGCTATAGGTTGAATTTGTCGATGGGCCATGACAACCAAATTGCCAAGTTAAGGTTAAAGTTATTGGCTCTCGAATCTTTGCCACAACTGCTGGCTTTTCCTGAGTGGCTGCAAGGATCTGTGAACACATTACAGTCCTTGGTAATTGTTGATTGTGACCATCTTAAGGATCTTCCTGAGTGGCTGTCAACTATGATTTATCTCAAAACACTTTCAATCCAAGATTGTCCAACACTGCTTTCGCTCCCAGATGGTGTGCATCACCTCCGAAACCTTGAATATTTGAAAATTAAAGGTTGTCCTGAATTGTGTAGAAGATACGAAACAAAAGTTGGACAGGATTGGCCCAAGATATCACACATCAAACAAGTTATTATTGAATCACCCGAGCTAGAAGATTAG 2544 0.3844 MAESLLFGLAESFIVKLASSAVKQASLALGVYQDLQEIRDTISFIKAVLLDAEKKQHQNQELREWMRQIKRIFSKAEDIIDDFECEALQKQVVNTSGSRRKKVRRFLSSSNPIVYRLKIAHRIQHIKESLNKVAEIRDKFGLHIKESDDRVVQRRETHSHVNDSDVIGREQDKQKIVELLFDDSDDKNLSVVAIVGLGGMGKTTLAKVVFNDKSVVDSFPLKMWICVSDDFDVKNLLVKIIGSAPDQNHQENIKNFSLEQLKNRLRDILAGQKFLLVLDDVWNEDRVKWEEFRGLIPAGAQGSKVLVTSRSDTVANMMGTYTSYNLQGLSKEDSLSVFVKWAFKEGEESKHPELMEIGKDIVLKCGGLPLALRTLGSSLFLKVDIQEWKFVRDNEIWNLPQKDEDILPAIKLSYDQLPSYLKQCFACFSLFEKDFHFNSFHTIVLWEALGFLQSPNKGDTLKDIGNKFLKELRSRSFLQDFIDYGYACKFKLHDLVHDLALYVSRDEFQLLNSHSDNISENALHLSFTKNYLFGKTPLPRGLRTILFPVGVNNEAFLNTLVSRCTCLRVLQINNSGYESLPSSIGKLKHLRYLNLEDNEKLKSVPDSVCKLQNLINLDLSGCIKLQELPNGIGNLISLQQLHITTLQSKFPDNEIAKLTFLEILTLVDCDNLESLFEGIEELPSLKFLDIYSCKSLRSVPLHVIPNLESLSIGNCYRLNLSMGHDNQIAKLRLKLLALESLPQLLAFPEWLQGSVNTLQSLVIVDCDHLKDLPEWLSTMIYLKTLSIQDCPTLLSLPDGVHHLRNLEYLKIKGCPELCRRYETKVGQDWPKISHIKQVIIESPELED* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2783 847 Pfam Rx N-terminal domain 11 98 IPR041118 -
Mtr1g2783 847 PRINTS Disease resistance protein signature 191 206 - -
Mtr1g2783 847 PRINTS Disease resistance protein signature 268 282 - -
Mtr1g2783 847 PRINTS Disease resistance protein signature 365 379 - -
Mtr1g2783 847 PRINTS Disease resistance protein signature 680 696 - -
Mtr1g2783 847 PANTHER OS08G0543100 PROTEIN 23 824 - -
Mtr1g2783 847 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 427 IPR027417 -
Mtr1g2783 847 SUPERFAMILY L domain-like 491 833 - -
Mtr1g2783 847 CDD RX-CC_like 12 138 IPR038005 -
Mtr1g2783 847 PANTHER DISEASE RESISTANCE PROTEIN RP 23 824 IPR044974 GO:0006952
Mtr1g2783 847 Gene3D - 149 323 IPR027417 -
Mtr1g2783 847 Gene3D - 11 124 - -
Mtr1g2783 847 Pfam NB-ARC domain 169 415 IPR002182 GO:0043531
Mtr1g2783 847 Gene3D - 328 418 IPR042197 -
Mtr1g2783 847 Gene3D Ribonuclease Inhibitor 540 846 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2783 Mtr-Chr1 39037299 39041589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2783 188 817 WRKY Transcription Factor Family AT5G45050 25.375 2.42e-17 85.5