Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2772 ATGGAAAACAACAACACCAACACTAACACCAACACCAACACAAACACCAACTACACCAACAACAACAACAATAATGAAAATCAAGTATTGAACATTGAAGTTGATTGTTCTGCTAAACAAAAGAAGAGAAGAGATTTGATCGATTTAAATGAATCTCCTCCTTCTCCTGATTATTCCGAGGATTCTGCTGATGATTGCCATGTGGCAACAAGAGGAGATGTAAGACTCCAAGCTGAAACTGAAGTTCAACAACCAGCGTTGAATTTCTCATCCCCAACACCACCTGATCAAAGACATGGTGCAGAAGAAGAACAAGACCATGTGCAAAATGATGCAAATGTAGTGGTGAAAAATGCTGAAATTCTAAGGGCTAGGAAAGGGAAGATGCCAATGAACTTTTCTGAAGCAGTGCATGCCAAAGAAGATAGTATAACTGATGATAAAGAAACAAATGTACCAACTGATGGTCAAGTTTCAGATACACCTGCGGATGATGAAGCAACTGCCATTGGAGGAATGATGTTGCTTCAATATGATGATGGTGGTGCTAGTGGATCTTGTCCACAAAGGAAGAGAAAGAGGGACTTCTCTGAATGCTATAAAACACCTTGCCCCATGACAGATGCCGGGCAAAAAATAGTGATCCGAGTTGAAAGCGATGAAGACATTTTGGATGATGGTTATTGTTGGCGCAAGTACGGATGCAAAGAGATCAAAGGAAATCCTAACAATCCTAGGGGGTACTACAAATGTTCAACACACAATTGTAACATTAAAAAACAAGTGGAAAGGGATGCTAAAGATCCAAAATATGTACTTGTTACATATGATGGAAAACATACCCATGGACCTGTCATTGATAAGAAAAGTCGACCAACATACTCGAGAAATACTAATGCAGCTGGAGTGCGTAGAAATGCCAGCATGCCGCCACCACCATCACCACCATCTGCATTGCCTATGGTTCACCCTCTCCCTCCTTTTCACCAATATGGCTATATACCTTATGGTATGAATTACGGTTGGCCTAATACCATGATGTGGCCTTTATTAAACATGTCGGGCAATACCATGATGCAACCTTTCTTGAACATGACGGGTAACACCATGATGCAACCTTACAGACCCATAAGTGAACAAAATTTTCTAGAACGTCGTGTTTCAACTCCAACTCCTATTGGTACAAATCAAGTTGGACCTAATATCAATAGGGCAGTTCCGCTTCCTGTATTTCCGATATCACCATCATTACCACCATTTCACATTGTACCATATGGTGGGGATTTTCTTCAGGTTGGTGGAAATGGTATTGTTGCTGCTCCAGTCTTTCCTTTCATGGGTACTTCACCAGCTGATCAGGAAGCTACAAATGTTCCTGACACCGAATGA 1389 0.4111 MENNNTNTNTNTNTNTNYTNNNNNNENQVLNIEVDCSAKQKKRRDLIDLNESPPSPDYSEDSADDCHVATRGDVRLQAETEVQQPALNFSSPTPPDQRHGAEEEQDHVQNDANVVVKNAEILRARKGKMPMNFSEAVHAKEDSITDDKETNVPTDGQVSDTPADDEATAIGGMMLLQYDDGGASGSCPQRKRKRDFSECYKTPCPMTDAGQKIVIRVESDEDILDDGYCWRKYGCKEIKGNPNNPRGYYKCSTHNCNIKKQVERDAKDPKYVLVTYDGKHTHGPVIDKKSRPTYSRNTNAAGVRRNASMPPPPSPPSALPMVHPLPPFHQYGYIPYGMNYGWPNTMMWPLLNMSGNTMMQPFLNMTGNTMMQPYRPISEQNFLERRVSTPTPIGTNQVGPNINRAVPLPVFPISPSLPPFHIVPYGGDFLQVGGNGIVAAPVFPFMGTSPADQEATNVPDTE* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2772 462 MobiDBLite consensus disorder prediction 139 164 - -
Mtr1g2772 462 MobiDBLite consensus disorder prediction 44 65 - -
Mtr1g2772 462 ProSiteProfiles WRKY domain profile. 219 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr1g2772 462 Pfam WRKY DNA -binding domain 225 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr1g2772 462 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 57 286 - -
Mtr1g2772 462 SUPERFAMILY WRKY DNA-binding domain 218 283 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr1g2772 462 MobiDBLite consensus disorder prediction 282 316 - -
Mtr1g2772 462 MobiDBLite consensus disorder prediction 81 95 - -
Mtr1g2772 462 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 57 286 IPR044810 GO:0003700
Mtr1g2772 462 SMART WRKY_cls 224 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr1g2772 462 MobiDBLite consensus disorder prediction 1 26 - -
Mtr1g2772 462 MobiDBLite consensus disorder prediction 80 107 - -
Mtr1g2772 462 Gene3D WRKY domain 208 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2772 Mtr-Chr1 38908778 38911759 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2772 199 282 WRKY Transcription Factor Family AT1G64000 53.571 1.28e-24 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr1g2772 WRKY 5e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2772 - K18835 mtr:MTR_1g078260 894.804