Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2757 ATGAAGGGGCGATCGAATCGCCCGATGGATCCACCACCGGATGAATGGGTCGACGGTTCATGGACGGTGGACTGTATATGCGGCGTCAATTTTGACGACGGCGAAGAGATGGTAAAGTGCGACGAATGTGACGTATGGGTTCACACGCGTTGTTCTCGTTACGTTAAAGGTGATGACATGTTCGCTTGTGACAAGTGTAAAGCGAAGAACAATCGTGTCGGAGCGGAGAATAATATTGAGGAAACTGAGGTTGCGCAGTTTCTTGTGGAGCTTCCGACAAAGTCGATTCCTTTGGAGAGAAGGGGGAATGGTAATAGGAGTAATGGAATTGCTTCTTCTAGGGTTGCATCGTGTTCGCGGAGGCCGTTTAAGCTTTGGACTGATATACCTATGGAAGAGAGGGTTCATGTTCAGGGGATACCTGGTGGGGATCCTGAGTTGTTTGAGGGGAAGACCGTGTCGTCGATTTTTGGGCCGCAGTTGTGGAAATGTACTGGGTATGTTCCTAAGAAGTTTAGTTTTCAGTATAGGGAGTTTCCTTCTTGGTATGAGAATGAGAATGAAAATAATGATAAGGGTTTGCAAGAGAACGAGGATAATGGGGCTGGGGTGCTTTTGTCATTGTCGAAAGAGGTTAATAATATGTTGGCGAAGTCGCCTGTTACGGCTTTGGTTGATACGGGATCGAGGCAGGGTAAGAAGGGTTTTAAGGAGAGTGGAACTGGTAAGTTAGGGAAGGATCATATGCCGCGTGTCCATAATGCGGTTAAGAAGGAGAGGAATTTGCTTAGGCCGTTTGTTGTTCATTCAAGTAAGCGTAGGAAGGATGAATTATCAAAAGACCGGAGTGGGAAGAAGAAGCGGGTTAAAACTTCTGATAGAGAGGAGGTGGATATCAAGAAGAGGACTTCTGACAGAGAGGATGTTGATCCCAAGAGAAGAAGTTCTGACAGAGAGGATGTTCATCCCAAGAGGAAGACTTCTGATAGAGAGGATGTAGATCACAAGAGGAGGACTTCACATTCTTCTAAAGCAGCATTTACACCCACCTGTGATGCAAAACAATTGGCATTTTATGGAGACAGAGGTCCGAAGGTTTTCAAGGATGACATTCGGAGCATAAAGAATAAAAACTTAAAAGACACAGTGGTTCAAGATCATATTTCTAATGACTCTTTTGCGGTGGGTACCACCATAGAGGTATCGAATAACAACTTGACAACTACCGAAGAGTCTTCAGAAGCGTTATATACCAAGAAAACAAGGCGTAGTCATTCTGCTGGAGATGTATTAGCAGAAGAGAAGACTGGCAATAAAGTTCTCGAGATGTCGTCTAAGACTGATGATGCCGTTACATCAGTTCTGAAGCATACTTATCTTGAAAATGCCTCAGCTAAAAAGAAGGGCGGAGATTGCTTGGAAGCTAATAATTTGGATGAAACTTTAGTAGTAAGAAGCCCTATGAGTCCGCAGACAGAAGATCCTCGTGGTTCTGCACCAGAACATATGGAAAAGCAAGTTTCTCAAGATATTGACTGTAACCAGCATCCAAGCTCTGGACAATACAAAGTTAAGGTGAAGAGAGAAGATGACAAAGACAAATTTAAGCACTCAAAGTTTCATTTTTCGTCCATCAGCGATCTTAAAAACAATGGAAAGTCATCTGATCCCACATCTGATATTGGTAAAGTGAATGATGCTGCAGTTCTCACTTTACCTTTATGTGAAAATAAGGTGGGTGATGTTGGCATATCATCAGAAGTAGTCCCTGATAGTCATACCAATGAACTACCTGGTAATTTTTCTCATGGAAAAGAAGTCGAGGGATCTGAAGGTTCCTTTGAAACACAAAAGGGATTCTCAGAAACAAAAGATGGTATCGACTCTGCTAAAAATCTATCAAAATCCGAAGCACTTGAATGTCAAAGTAAAATGCCAGCTTCTGTCCGGAAGACGTCTCCAACTTCATCAATCATAAACTGCAAATCACCAAGCCAGGACTTCAAATGTGAAGATACTGAAACTGCTAATCCTTTTACAAAGCATGGAGCTAAAGCTGACCATAACATTCACATAAAGAATGGAAGTTGTACGAATGATGGAGCAAGGGATGAAATTCCAAGGAAGTATGTAAGAGAGCGTCCAAGATCCTCTTCAAAATCCTCTTTACATTCAAGCCAGAGTACGCAAAATTCTGTTCCAAAGCAAGCAAATCCAGACGTGAGAGATTCTGTTCATTGTTCGTTATCTAAACCATCCTTGGGTCACCAGACTCCAAGTGTCGTTGGTTCTAGCGAGACTAATGCATCAATGCACCATCAAAAAGGATTGCAAGGGCAGAATAAAACTTCATCTTTAGTGCCACAGAAAGCAGAAAGGCTTAATCAAACAAATACCCATTCTTCCTCTAAGTTGAACCAGAACCACACACCATCATTGAATCCTTCTCCAACATTAAATTCTTCAATGCTGAGTGATGAAGAGCTAGCTTTGCTATTGCATCAAGAACTGAATAGTTCACCTCGTGTACCACGGGTACCCCGTGCACGCCAAACAGGTAGCTTGCCACAAACAGGTACCAGTGCTACAAACATGCTAATGAAGCGAGCATCGGTTGGAGGAAAGGATAACTATTTGGTATCTAAAAGAAAATACAAGGATGCAACTAGAGACGGGTTTAGCAGTTCTCGTGAACCAGAAGATGAAGCTAAACGGATAGAGAATGAGAAGGGTCAATCATCATCTGATCAGAGAAAACAAGACACAGCGTATGTGGAAGATGCTTCTGTAAAGGAAGAAGGAGGCCGTGCATGTGTGACAGCTGCAAACTCTATTACAAACAATGTTGTTTCCACAACCCCTGCCATTGCAAACAGCGGTTCACCTTCCCCCTGTGAGGATCGAAATTTGTCATCAATGAGGAACTCACCGAGGAATATATCTGATGATGATACAGCAACTGCTGGAAGACCAGTTCATCACACCTTACCTGGCTTAATCAATGAGATAATGAGCAAGGGCAGGCGCATGACTTACGAAGAACTCTGTAGTGCTGTGCTACCGCACTGGCCCAACTTAAGGAAACACAACGGAGAGCGATATGCATATGCAAGTCCCTCCCAAGCTGTTCTTGATTGTTTGAGGAACCGACATGAATGGGCAAGATTGGTTGATCGTGGTCCAAAGACAAATACTAGGAAAAGGCGTAGTAAGCTGGATGCTGAAGAATCTGAAGATAATGGATATGACAAAGGTAAAACTGCAAAAGAGACCGATGGGAAGAACTTTGAGTTGCAAAAAGAAGAGTTCCCTAAAGGCAAGCGTAAAGCTCGAAAACGCAGGCGGCTGGCTCTTCAGGGAAGAGCAGTAAAGGATGTCAGGAGGAGGCAAAAAGGCGACTCACTAACCGGTGAGGATGTCGGTCCATTCTCCAATACTAGCGAAGGGAGCTTGTTCAGTGAGGATGAAGTTCAAGTTGACAGAATAGGTCCAGCAGGAAGTACATCAGATGATGAGGCGGGGAGTGCTTAA 3531 0.4353 MKGRSNRPMDPPPDEWVDGSWTVDCICGVNFDDGEEMVKCDECDVWVHTRCSRYVKGDDMFACDKCKAKNNRVGAENNIEETEVAQFLVELPTKSIPLERRGNGNRSNGIASSRVASCSRRPFKLWTDIPMEERVHVQGIPGGDPELFEGKTVSSIFGPQLWKCTGYVPKKFSFQYREFPSWYENENENNDKGLQENEDNGAGVLLSLSKEVNNMLAKSPVTALVDTGSRQGKKGFKESGTGKLGKDHMPRVHNAVKKERNLLRPFVVHSSKRRKDELSKDRSGKKKRVKTSDREEVDIKKRTSDREDVDPKRRSSDREDVHPKRKTSDREDVDHKRRTSHSSKAAFTPTCDAKQLAFYGDRGPKVFKDDIRSIKNKNLKDTVVQDHISNDSFAVGTTIEVSNNNLTTTEESSEALYTKKTRRSHSAGDVLAEEKTGNKVLEMSSKTDDAVTSVLKHTYLENASAKKKGGDCLEANNLDETLVVRSPMSPQTEDPRGSAPEHMEKQVSQDIDCNQHPSSGQYKVKVKREDDKDKFKHSKFHFSSISDLKNNGKSSDPTSDIGKVNDAAVLTLPLCENKVGDVGISSEVVPDSHTNELPGNFSHGKEVEGSEGSFETQKGFSETKDGIDSAKNLSKSEALECQSKMPASVRKTSPTSSIINCKSPSQDFKCEDTETANPFTKHGAKADHNIHIKNGSCTNDGARDEIPRKYVRERPRSSSKSSLHSSQSTQNSVPKQANPDVRDSVHCSLSKPSLGHQTPSVVGSSETNASMHHQKGLQGQNKTSSLVPQKAERLNQTNTHSSSKLNQNHTPSLNPSPTLNSSMLSDEELALLLHQELNSSPRVPRVPRARQTGSLPQTGTSATNMLMKRASVGGKDNYLVSKRKYKDATRDGFSSSREPEDEAKRIENEKGQSSSDQRKQDTAYVEDASVKEEGGRACVTAANSITNNVVSTTPAIANSGSPSPCEDRNLSSMRNSPRNISDDDTATAGRPVHHTLPGLINEIMSKGRRMTYEELCSAVLPHWPNLRKHNGERYAYASPSQAVLDCLRNRHEWARLVDRGPKTNTRKRRSKLDAEESEDNGYDKGKTAKETDGKNFELQKEEFPKGKRKARKRRRLALQGRAVKDVRRRQKGDSLTGEDVGPFSNTSEGSLFSEDEVQVDRIGPAGSTSDDEAGSA* 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2757 1176 MobiDBLite consensus disorder prediction 681 821 - -
Mtr1g2757 1176 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SET-26-RELATED 1 1173 - -
Mtr1g2757 1176 MobiDBLite consensus disorder prediction 1139 1153 - -
Mtr1g2757 1176 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 74 IPR013083 -
Mtr1g2757 1176 SUPERFAMILY FYVE/PHD zinc finger 14 71 IPR011011 -
Mtr1g2757 1176 MobiDBLite consensus disorder prediction 702 719 - -
Mtr1g2757 1176 MobiDBLite consensus disorder prediction 953 993 - -
Mtr1g2757 1176 MobiDBLite consensus disorder prediction 223 348 - -
Mtr1g2757 1176 MobiDBLite consensus disorder prediction 953 983 - -
Mtr1g2757 1176 MobiDBLite consensus disorder prediction 483 530 - -
Mtr1g2757 1176 MobiDBLite consensus disorder prediction 851 867 - -
Mtr1g2757 1176 ProSitePatterns Zinc finger PHD-type signature. 25 66 IPR019786 -
Mtr1g2757 1176 MobiDBLite consensus disorder prediction 231 341 - -
Mtr1g2757 1176 MobiDBLite consensus disorder prediction 644 669 - -
Mtr1g2757 1176 PANTHER UNCHARACTERIZED 1 1173 - -
Mtr1g2757 1176 MobiDBLite consensus disorder prediction 887 933 - -
Mtr1g2757 1176 MobiDBLite consensus disorder prediction 838 869 - -
Mtr1g2757 1176 MobiDBLite consensus disorder prediction 720 738 - -
Mtr1g2757 1176 MobiDBLite consensus disorder prediction 750 821 - -
Mtr1g2757 1176 MobiDBLite consensus disorder prediction 1058 1176 - -
Mtr1g2757 1176 MobiDBLite consensus disorder prediction 1119 1135 - -
Mtr1g2757 1176 MobiDBLite consensus disorder prediction 590 628 - -
Mtr1g2757 1176 SMART PHD_3 24 67 IPR001965 -
Mtr1g2757 1176 MobiDBLite consensus disorder prediction 1058 1105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2757 Mtr-Chr1 38713233 38720902 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2757 23 66 PHD Transcription Factor Family AT5G22260 42.553 3.65e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2757 - - gmx:100810855 1355.12