Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2752 ATGGGTTCAGGAAGCAGAAGCTACTCAGCGAATCCTCAAGATTACAAGCTTCTAGAAGAAGTTGGTTACGGTGCAAGCGCAACGGTTTATCATGCAGTTTATCTTCCATACAACGAAGAAGTAGCGGTGAAATCTCTCGATCTAGATCGATGCAATTCAAATTTCGATGATATTCGTAAAGAAGCACAGATCATGAGCTTAATCGATCATCGAAACGTTGTCAAATCGTATTGTTCGTTCGTTGTGGATCGTAAACTTTGGGTGATTATGCCTTTTATGGCGCAAGGTTCATGTTTGCATTTGATGAAATCAGCTTATCCTGATGGATTTGAAGAAGATGCTATTGGATCCATTTTGAAAGAGACGTTGAAAGCTTTGGATTATCTTCATCAACATGGACACATTCATCGTGATGTTAAAGCTGGTAATATTTTGCTTGATTCTAATGGTGAAGTCAAACTTTCGGATTTTGGTGTTTCTGCTTCTATGTTTGATACTGGTGATCGTCAGCGTTCTAGAAATACTTTCGTCGGTACTCCTTGCTGGATGGCGCCGGAGGTGTTGCAACCTGGTACTGGTTATAATTTCAAGGCTGATATTTGGTCTTTCGGAATTACGGCGCTTGAGTTGGCTCATGGTCATGCGCCTTTTTCGAAGTATCCTCCAATGAAGGTTTTACTCATGACCATACAGAATGCACCTCCTGGCCTTGATTACGATCGTGATAGAAAGTTCTCGAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTGGTAAAAGATCAAACGAAGAGGCCGTCTGTGGACAAGTTACTGAAACACTCATTCTTCAAACAAGCTAAGCCTCCGGAGCTTTCTGTGAAGAAATTATTTGCTGATTTACCGCCTCTTTGGACTCGTGTAAAAGCCCTCCAGCTTAAAGATGCAGCTCAACTAGCACTGAAGAGAATGCCTTCTGCAGAACAAGAAGCAATATCTCAGAGTGAATATAAGCGAGGAGTTAGTGCATGGAATTTCGACGTTGATGATTTGAAAGCTCAAGCTTCATTGGTACAAGAGGAGGATGATGATATTGCAGAGATAAAGGAAGAAGATGAAAACAAGTTCTTCAACTCTAATAAGGATACAAGTGATTCCCAGTTTGGTGTGGACAAGAGGAATTCAGATAACTCACAGGAAAATGAGTTCGCATTACAAGTTGGTGGTAGTAATGTGCCCGCGTTACATGTTGGTGGTAATGACATACTTCAGAGTGATAAAAGAAATGGATCAATTGCTGAGGCAACAACATCTACTTCAGAGAAGGACATGGGAACAGGAAAGATTAAAACTCAGGCAGTGAAAGTTGGCAAAACCCAAAGTGGGCCACTGGTGCCTGGAACAGTGCTTGGTCATTATTTACCCGAAAAAGGGCGTCTATTTGAAAGGTTTGAGAATGAAAATCAGTTACCTGGTGAGAAAATTAATCGTGATATGCGACGAGCTCCAAGCTTTAGTGGTCCATTGATGCTTCCTAATCGAGCTTCGGCAAATAGTTTATCAGCCCCAATAAAATCCTCTGGAGGATTCAGAGATTCCCCAGATGATAAATCAAAGGCTAATCTAGTGCAAATTAAAGGGCGGTTCTCAGTGACATCAGAAAATTTAGATCTAGTGAAGGATATTCCTGCAAGTTCAGTTTCACGTCGATCTTCACAGGATTCTTCACCACTGAGGAAATCTGCCAGTGTTGGTGATTGGATGTTGGATTTCAAACAACAAATGCCAACTGGACAGTCTTCCAATGATTCTGCCAATTTGAATGTTCCCGCATCAGTTATCGTGCCTCACCTTCACAATCTTTACCAGCAGATGTCTATTCAACAGGATCTTATAATGAGTCTGTTGAGTAGCTTGCAAACTGCTGAGCCAAATGATGCTTCTCAGAATGGAAAATTGCCACCAATGCCTCGCAGTTCAGAGAATAATGGCAGTGTTGATACAGCAACTTCAGAAAGAGAACAACTTCTACTGGCCAAAATTTCAGAACTTCAGTCTCGGATGGTCAGTTTGACAGATGAACTTACTTCTGAGAAGTTAAAACACATGCATTTGCAACAACAGGTAGCAGCTTTCTACAGTCAGCAACAAAACGGGGAAAGAGAGGAAGGTGCATGA 2154 0.4155 MGSGSRSYSANPQDYKLLEEVGYGASATVYHAVYLPYNEEVAVKSLDLDRCNSNFDDIRKEAQIMSLIDHRNVVKSYCSFVVDRKLWVIMPFMAQGSCLHLMKSAYPDGFEEDAIGSILKETLKALDYLHQHGHIHRDVKAGNILLDSNGEVKLSDFGVSASMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDQTKRPSVDKLLKHSFFKQAKPPELSVKKLFADLPPLWTRVKALQLKDAAQLALKRMPSAEQEAISQSEYKRGVSAWNFDVDDLKAQASLVQEEDDDIAEIKEEDENKFFNSNKDTSDSQFGVDKRNSDNSQENEFALQVGGSNVPALHVGGNDILQSDKRNGSIAEATTSTSEKDMGTGKIKTQAVKVGKTQSGPLVPGTVLGHYLPEKGRLFERFENENQLPGEKINRDMRRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSPDDKSKANLVQIKGRFSVTSENLDLVKDIPASSVSRRSSQDSSPLRKSASVGDWMLDFKQQMPTGQSSNDSANLNVPASVIVPHLHNLYQQMSIQQDLIMSLLSSLQTAEPNDASQNGKLPPMPRSSENNGSVDTATSEREQLLLAKISELQSRMVSLTDELTSEKLKHMHLQQQVAAFYSQQQNGEREEGA* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2752 717 MobiDBLite consensus disorder prediction 416 438 - -
Mtr1g2752 717 MobiDBLite consensus disorder prediction 506 530 - -
Mtr1g2752 717 CDD STKc_OSR1_SPAK 14 276 - -
Mtr1g2752 717 SUPERFAMILY Protein kinase-like (PK-like) 13 326 IPR011009 -
Mtr1g2752 717 SMART serkin_6 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2752 717 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Mtr1g2752 717 MobiDBLite consensus disorder prediction 411 440 - -
Mtr1g2752 717 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Mtr1g2752 717 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 4 710 - -
Mtr1g2752 717 Coils Coil 343 363 - -
Mtr1g2752 717 Pfam Protein kinase domain 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2752 717 Coils Coil 673 693 - -
Mtr1g2752 717 ProSiteProfiles Protein kinase domain profile. 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2752 717 MobiDBLite consensus disorder prediction 364 390 - -
Mtr1g2752 717 Gene3D Transferase(Phosphotransferase) domain 1 96 323 - -
Mtr1g2752 717 MobiDBLite consensus disorder prediction 372 390 - -
Mtr1g2752 717 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 4 710 - -
Mtr1g2752 717 MobiDBLite consensus disorder prediction 634 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2752 Mtr-Chr1 38631895 38640986 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2752 8 709 MAP Kinase Kinase Kinase Kinase AT4G10730 63.636 0.0 890
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Mtr1g2752 Pkinase 1.4e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2752 - - gmx:100783699 1148.27