Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2750 ATGGAACCAAGCAAAAATGAAGAACTAGGTGGTGATGAAATTGAAGTTGATGGAAAATTAGTTGAACCTAGCCCCAGAAGGAGAAATCCAGAGATCGCGATCTTAAATCAAATAGGTTCTTCATATAGGTCTCCCAGAGAGCCTAGAATAAATATAATAACAACCAGCAAGATTGATCTCTTAGAAGATGGGTATAATTGGAGAAAATACGGGGAACAAGTTTGCATAGGAAACCCTAATCCTAGGAGCTACTACAAATGTACGGCACCAGGTTGTAGCATTCGAAAGTGTGTAGAGAGAGCTTGGGTGGATCCTAAAGATGTCATAACAACGTATGTAGGAAGACATAATCATGACGTTCCAACATCTATGGCTAATAGCCACACCATTTCCGAGGAGCCTAGTTTTGACGGTATTGGTAATGGTGGCGACACTATTTAA 441 0.4036 MEPSKNEELGGDEIEVDGKLVEPSPRRRNPEIAILNQIGSSYRSPREPRINIITTSKIDLLEDGYNWRKYGEQVCIGNPNPRSYYKCTAPGCSIRKCVERAWVDPKDVITTYVGRHNHDVPTSMANSHTISEEPSFDGIGNGGDTI* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2750 146 MobiDBLite consensus disorder prediction 124 146 - -
Mtr1g2750 146 SMART WRKY_cls 61 120 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr1g2750 146 SUPERFAMILY WRKY DNA-binding domain 53 121 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr1g2750 146 ProSiteProfiles WRKY domain profile. 56 121 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr1g2750 146 Gene3D WRKY domain 47 122 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr1g2750 146 MobiDBLite consensus disorder prediction 1 26 - -
Mtr1g2750 146 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 5 134 IPR044810 GO:0003700
Mtr1g2750 146 MobiDBLite consensus disorder prediction 1 28 - -
Mtr1g2750 146 PANTHER OS04G0471700 PROTEIN 5 134 - -
Mtr1g2750 146 Pfam WRKY DNA -binding domain 62 119 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2750 Mtr-Chr1 38622041 38623786 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2750 2 130 WRKY Transcription Factor Family AT2G03340 54.615 7.71e-45 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr1g2750 WRKY 1.6e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2750 - - mtr:MTR_1g077780 310.071