Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2743 ATGGAAATGGCAATGTCTTTTAGTTTAAGGAATAAGCTTAAGACTCTTTGTGCTTACGGGGATGGTTGGTCTTATGCCATTTTCTGGCGCTTTCATCAAAGGAATCCTATGTTGTTGAATGTGGAAGAAACATACTATGAAGAGCAATTGGGAGAAGAGATTACAAAAATAGTTCCACAAGTGCATTTGCTGGGTGAAGGTATTGTTGGTGAAGCTGCTTTCACAGGGAAGCATAGTTGGTTGCATTCAGTTAGTTCTGAGGATGATTCTGGATTGTATCAACAATTATCTTCTGGGATAATTAAGACAATTGTAGCCATACCTGTCAATGCATGTGGAGTGGTACTGTTTGGATCCAGAAATAAGATTTTGGAGACAACAGATTTTTTGGATCAAACACAAAGTTTACTCAAGGAGATAAACGGTATTGACATGATAGACGGGTCAGGAAATGAAGTTTTATCGATGGATTTTACAAATGATGATCTCAACGGGTTGCTAGCTTCCATTTCCTCTAAAAATTCATGTGATTGGAATCTAAAATATGCTCATGAAGAAAACCATAAAGATCTGAGAGAAGTTTTTTCTTCGTTTGAAGAAGGAATAACTTCAGTAGAATTTGATTCTTCATCTTTTAATGACCAATTCAAAGATACCATAGAAGCTTTTTTGCAGCCTAACTCTTCTATGAACAACTTGATTTCCAAAAGTACCTCTCTTTTTGGTGAAAAATCTTGTTTTGAGTCATTGGAGCAACAATTTGTATCTGAAATAATGGCACAGGAAGTTGCAGATGTTTCAACTTCATTTGCTAGCAGCATAGTTCAAGATACAGAATTGACTTCATTGCAAAATATGGACAGAGTTTCATTTCAAGACAAACATTCTTCTCAATCTGATGTTGTGATTGAAGTTGATTTACCATCAAGTTCAAAAACACTACTACAAGGAATCTCTAATACCTTAGAGCTGGTCGATATGTCCGAAGAATTTTTGAAGTTCAGTTCCATGGATGATCTTTGCCAATGGTTTGCTCCTTCATCAGAGGATACTAGTATCTGCAGAAAAATGATTCAATTGGATAATACCCTTTCTGAATCAATAGAGTTTAATCCTGATTGCACTGATCTAGGACTAGCTGAGAAAGAAACATCTGTAGTAATACATAATTCTGAGAATGGTTTCTTGGATAGCACGGAATTTGATCTGGGATGCGATCAAGGTAGTGAATGGTGGGGGAATTTACTTACACCAGTGGTGAGTGCTGATACTGATAATACTGGCTTTTCTGAATGCATATCAGAGTTGAATACCGGTACACCGACTGATAATACTCGGAAGAGGTTATTCTCAGAGTTAGGAATTGAAGAGCTTTTGAGAGGTGAAGCAATTTACAACAATCCTTTTAATAGTTCTAATTTTGAAAATGAGCTGTTATCATCTAATAAAAAGCAGATGGTAGAACTTTCTCCCTTGAATCAAACTCAAGTACATTTTGCAAACCTTGATGGAACTGAAACTAGACCAAACTTGATGCATTCTGTTTCTGACTTGGACAAGTCCAATAGTGTTATAACAAGGAAAGATACACTCCCAAAATTACAAGTAGGTATGTTGGTTAATGATAGAAATAGCATCAACCTTAAGAGGGCTGTTCCGGTACACCCTAGAAAACTGGACGAGCCCGCAAAGCCCAACAAGAAGAAGGCTAAGCCGGGGGAGAGCACTCGGCCACGACCAAAAGATCGGCAGCAGATTCAAGACTGTCTTAAAGAGTTGCGTGGCATCATCCCTCATGGTGGAAAGTGTAGCATCGATTCTTTGTTAGACCGCACCATCAGATACATGCTTTTCTTACGCGGTGTCATCAAATATGCAGACATACTACAAGAGCCTAATGAGACAAAGCTTATTGAGCAAGCAAATGAAGTGGTTCCAAAAGACAGCAATGTGGCACATAACAAAAACCATGGTGCTACATGGGCATATGAAGTAAAAAACCAAACAATGGTATGTCCAATTATAGTCGAGGACATGAAATCACCTGGCCAAATGCTTATAGAGATTCTTTGTGAAGATCAAGGTTTCTTCCTTGAGATAGTCGACATAATTCGAGGTTTCGGGCTGAATATCTTAAAAGCAAAGATGGAAACAAGGAAGAAAAAACTATGGGCACACTTTATTGTTGAGGCAAATAGACATGTGACGAGGATAGATGTGTTTTGGTCACTTATCAATCTTCTTCAACAACCAAACACCGCCGCAATCGATTCTTCTAATAAGCATTGCAACACTATTAATTAA 2304 0.3789 MEMAMSFSLRNKLKTLCAYGDGWSYAIFWRFHQRNPMLLNVEETYYEEQLGEEITKIVPQVHLLGEGIVGEAAFTGKHSWLHSVSSEDDSGLYQQLSSGIIKTIVAIPVNACGVVLFGSRNKILETTDFLDQTQSLLKEINGIDMIDGSGNEVLSMDFTNDDLNGLLASISSKNSCDWNLKYAHEENHKDLREVFSSFEEGITSVEFDSSSFNDQFKDTIEAFLQPNSSMNNLISKSTSLFGEKSCFESLEQQFVSEIMAQEVADVSTSFASSIVQDTELTSLQNMDRVSFQDKHSSQSDVVIEVDLPSSSKTLLQGISNTLELVDMSEEFLKFSSMDDLCQWFAPSSEDTSICRKMIQLDNTLSESIEFNPDCTDLGLAEKETSVVIHNSENGFLDSTEFDLGCDQGSEWWGNLLTPVVSADTDNTGFSECISELNTGTPTDNTRKRLFSELGIEELLRGEAIYNNPFNSSNFENELLSSNKKQMVELSPLNQTQVHFANLDGTETRPNLMHSVSDLDKSNSVITRKDTLPKLQVGMLVNDRNSINLKRAVPVHPRKLDEPAKPNKKKAKPGESTRPRPKDRQQIQDCLKELRGIIPHGGKCSIDSLLDRTIRYMLFLRGVIKYADILQEPNETKLIEQANEVVPKDSNVAHNKNHGATWAYEVKNQTMVCPIIVEDMKSPGQMLIEILCEDQGFFLEIVDIIRGFGLNILKAKMETRKKKLWAHFIVEANRHVTRIDVFWSLINLLQQPNTAAIDSSNKHCNTIN* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2743 767 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 5 767 - -
Mtr1g2743 767 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 583 625 IPR036638 GO:0046983
Mtr1g2743 767 MobiDBLite consensus disorder prediction 553 585 - -
Mtr1g2743 767 MobiDBLite consensus disorder prediction 550 585 - -
Mtr1g2743 767 CDD ACT_UUR-ACR-like 686 729 - -
Mtr1g2743 767 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 5 767 IPR043561 GO:0003700|GO:0006355
Mtr1g2743 767 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 53 136 IPR025610 -
Mtr1g2743 767 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 570 619 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2743 Mtr-Chr1 38547914 38552784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2743 556 750 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 52.261 3.90e-60 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2743 - - cam:101509177 1039.64