Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2718 ATGGCCACCAGACGTTTACGTGCATTAAAGCGATGGATGAAGTCCAATGGATTCGAATGGAGCAGCGCATTGCAATTTGTGGACACCCCAGAAGAAGGAATATCCGTTAAAGCATTGTGTGAAATCAATGCAGGTGATGTGGTTGCGAAAATGCCAAAGAAAGCTTGTCTTACAATCAAGACTAGTGGTGCTTGTGAGATTATTGAGAATGCTTGTTTGGGTGGTTATTTGGGTTTAGCTGTTGCTATTATGTATGAGAGGAGTTTGGCTGAGGAGTCTCCTTGGGAGGGTTATCTTCAGCTTTTGCCTCAGCAGGAATGTTTGCCTTTGGTTTGGAGTGTTGAAGAAGTGGACCAGCTTTTGTGTGGTACTGAGCTTCATCAGACAGTGCAAGAAGATAAAGCTCTTGTCTATGAGGACTGGAGAGAGAATATTCTACCCCTGTTGGATTCAGAACCTTCAAAGCTTAACCCAGCATTCTTTGGTGTGGAACAGTACTTTGCAGCCAAAAGTCTTATTTCTTCTCGATCTTTCGAGATAGATGATTACCATGGTTTTGGCATGGTTCCCCTGGCAGATCTATTCAATCATAAAACTGGTGCGGAAGATGTGCATTTCACCGCATTGTCTTCTAACAACGAATCTGAGGATGACACTGATGATGAAATTGTTGATGAAGAAGCATTAGCTCAAAATTCCTCTATGGATAAAACTGAGAAAGGTGTTGATAGCGACATGGAGTATTCTTCAATTACTGAAGATGATACTTCAATGCTGGAGATGGTTATGATAAAAGATGTTAGCAGTGGAGCCGAGGTATTTAATACTTATGGGATATTGGGTAATGCCGCTTTGCTACATAGATATGGATTTACTGAGCAAGATAACACCTATGATATCGTGAACATTGATTTGGAACTAGTACTTCAATGGTGTTCTTCTTTGTTCTCTAACCGCCGCAGCAGATCAAGAGTCTCCCTTTGGAGAAGGTTAGGCTATTCCAGTGACACCGAAAACTCTGAATATTTCGAGATATCATTTGATGGAGAACCACAGATGGAACTCCTTATTTTATTATACATCATATTTTTACCAGATGATGTTTACCATAAATTAGACTTATCAGTAGCTGTTGCTGAGAATTTTCATGAATCAAGTGAAAAAACCACTTTTTTGAATGATAATATCTTTCTAAAGAAGCTGTCTAACATGAGCAAGAAAACTTTGATGACCAAAGAAGTTTGTGATGCTTTGTTGTCACTGGCTGATATGAGGGAGAGTCTCTATGGTTTGAAATCACTAGAAGATGATATTGAGGCATTGAAAAGGTCTAGTTTTGTTAGAGATAGAAAGCTGTATCATTCTTCGGTTCTGCGTATCAGTGAAAGGAAGATTCTTCAAAAACTCAGAAATTATGCTTCAAAGTCGTGTAAGATTACTAATCTTAGCTCTGCCGGGAAGAAGTTGAAAAGGACAACAAAGAGGGAGAGTTGA 1494 0.3949 MATRRLRALKRWMKSNGFEWSSALQFVDTPEEGISVKALCEINAGDVVAKMPKKACLTIKTSGACEIIENACLGGYLGLAVAIMYERSLAEESPWEGYLQLLPQQECLPLVWSVEEVDQLLCGTELHQTVQEDKALVYEDWRENILPLLDSEPSKLNPAFFGVEQYFAAKSLISSRSFEIDDYHGFGMVPLADLFNHKTGAEDVHFTALSSNNESEDDTDDEIVDEEALAQNSSMDKTEKGVDSDMEYSSITEDDTSMLEMVMIKDVSSGAEVFNTYGILGNAALLHRYGFTEQDNTYDIVNIDLELVLQWCSSLFSNRRSRSRVSLWRRLGYSSDTENSEYFEISFDGEPQMELLILLYIIFLPDDVYHKLDLSVAVAENFHESSEKTTFLNDNIFLKKLSNMSKKTLMTKEVCDALLSLADMRESLYGLKSLEDDIEALKRSSFVRDRKLYHSSVLRISERKILQKLRNYASKSCKITNLSSAGKKLKRTTKRES* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2718 497 CDD SET_LSMT 23 292 - -
Mtr1g2718 497 SUPERFAMILY SET domain 4 296 IPR046341 -
Mtr1g2718 497 MobiDBLite consensus disorder prediction 228 247 - -
Mtr1g2718 497 Pfam SET domain 33 278 IPR001214 GO:0005515
Mtr1g2718 497 Gene3D set domain protein methyltransferase, domain 1 2 291 - -
Mtr1g2718 497 ProSiteProfiles SET domain profile. 22 278 IPR001214 GO:0005515
Mtr1g2718 497 PIRSF RMS1_SET 1 477 IPR011383 GO:0016279|GO:0018026
Mtr1g2718 497 PANTHER RIBOSOMAL LYSINE N-METHYLTRANSFERASE 3 7 479 - -
Mtr1g2718 497 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 288 478 IPR036464 -
Mtr1g2718 497 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 7 479 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2718 1 495 NAC Transcription Factor Family AT3G56570 54.749 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr1g2718 SET 2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2718 K05302 - vra:106769924 702.975