Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2712 ATGGCTTCAACAAATAACCAGTTAGAAGCAACTGAACTTTTTGAAGGCCAATCTCTCTTATACATGCACATGTTTGGTTTTCTAAAATCCATGGCTCTTAAATGGGCTATTCAACTAAACATTCCAGACATAATCTACAACCATGGAAAACCTATTACTCTCTCTGACTTAGTTTCAACTCTACAAGTTCCAATATCTAAACAAAGTCTTGTGGAAAGACTCATGCGTTTTCTAGCACACAATGGAATATTTGTAATCCATGAGAAAGGTGAAAATGATGATGATGATGATCAAGCATATGCTTTGACTCCTGCATCAAAACTCCTTTCAAAATCATGTTGCAAAGACCATTGTTTAACACCAATGGTTCTTATGTCTACTGATCCAATTTTGATGGGTAAATTTCATCAATTGGGTGATTGGATTTGTGGAGAAATTCCAACTTTATATGAGGCAGCTTTAGGATCAACTGTGTGGGAATTTCTTGAGGGAAAACCTGAATATTTGAGTCTGTTTAATCAGGCTATGGCTAGTGATTCTCAAATGGTGAATTTGGCTTTGAAAAATTGTAGTAAGGTGTTTGAAGGGATTGATTCTATTGTGGATGTTGGTGGTGGAACTGGAACCACAGCTAGAATTATATGTGAGGCTTTTCCTAAGTTGAAATGTGTTGTTTATGATCTTCCACAGGTTGTAGCAAACTTGTCATCAGCATGTGATAATTTAAGTTACGTTGGTGGAGACATGTTCAAATCTATCCCTCAAGCTGATGCAATTATGCTAAAGTGGATTTTACATGACTGGACTGATGAAATATGCATAAAGATTCTAAAAACTTGTAAAGAGTCTGTTTCAAGCAACGGCAAAAAAGGAAAAGTGATTATTATGGATATAATAATAAATGAAGAGGATGATGAGAAAGATATGACTGAAACAAAGTTATGTTTGGATTTAATCATGATGGGGATTAATGGAAAAGAGAGAACTGGAAAAGAATGGAAGCACCTCTTCGTTGAAGCAGGGTTCAAAGACTATAAAATATTTCCATTATTTGGCTTTAGATCTCTTATTGAAGCTTATCCTTAA 1086 0.3508 MASTNNQLEATELFEGQSLLYMHMFGFLKSMALKWAIQLNIPDIIYNHGKPITLSDLVSTLQVPISKQSLVERLMRFLAHNGIFVIHEKGENDDDDDQAYALTPASKLLSKSCCKDHCLTPMVLMSTDPILMGKFHQLGDWICGEIPTLYEAALGSTVWEFLEGKPEYLSLFNQAMASDSQMVNLALKNCSKVFEGIDSIVDVGGGTGTTARIICEAFPKLKCVVYDLPQVVANLSSACDNLSYVGGDMFKSIPQADAIMLKWILHDWTDEICIKILKTCKESVSSNGKKGKVIIMDIIINEEDDEKDMTETKLCLDLIMMGINGKERTGKEWKHLFVEAGFKDYKIFPLFGFRSLIEAYP* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2712 361 Pfam O-methyltransferase domain 135 343 IPR001077 GO:0008171
Mtr1g2712 361 SUPERFAMILY "Winged helix" DNA-binding domain 12 111 IPR036390 -
Mtr1g2712 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
Mtr1g2712 361 Gene3D Vaccinia Virus protein VP39 114 361 IPR029063 -
Mtr1g2712 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 361 IPR016461 GO:0008168
Mtr1g2712 361 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Mtr1g2712 361 Gene3D - 1 109 IPR036388 -
Mtr1g2712 361 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 360 - -
Mtr1g2712 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 360 IPR029063 -
Mtr1g2712 361 PANTHER O-METHYLTRANSFERASE 2 360 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2712 Mtr-Chr1 38210012 38211950 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2712 2 347 Monolignol Biosynthesis Gene Families AT5G54160 32.773 9.78e-58 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2712 K22588 - gmx:100819853 485.723