Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2711 ATGGTATCAACAAATGACCAATTAGAAGCACTTGAACTCTTTCAAGGTCAATCTCTCTTATACACACACATGTATGCATCTCTAAAACCCATGTCTCTCAAATGTGCTGTTCAACTAAACATTCCAGAAATAATATATAACCATGGAAAACCCATTACTCTCCCTGACTTAGTTTCAACTCTAAAAGTTCCACTAGCTAAGTCTAGTCTTGTCAAAAGACTCATGCGATTTCTAGCACACATTGGAATCTTTGCAATCCATGGGAAAGGAGAAGATGATCATGATCAAACATATGCTTTGACTCCTGCATCAAAGCTCCTTTCAAAATCATGCAGCAAAGACCATTGTTTAACACCAATGGTTCTTATGTGTACTGATCCAATTTTTATGAGTTTATTTCATCAATTGGGTGATTTGATTCATGGGGAAGTTCCAAATTTATCTGAGGGAGCCTTAGGAGTAACTTTGTGGGAATTTTTGGAGGAAAAACCTGCATATAGTAGTCTCTTCAATGAAGCCATGGCAAGTAATTCTCAAATGGTAAGCTTGGCTTTGAAAAATTGTAGTGAGGTCTTTGAGGGGATAGAATCTATTGTGGATGTTGGTGGTGGAAATGGAACGACGGCTAAAATTATATGTGAGGCTTTTCCTAAGGTCAAATGTCTTGTTTTTGACGTTCCACATGTTGTCGCAAACTCATCATGTGAGAGTCAAAATGTAAGTTATGTTGGTGGGGACATCTTCAAATCTATCCCCAAAGCTGATGCAATTATGTTAAAGTCAATTTTACATGACTGGAGTGATGAAAATTGCATAAAGATTCTGAAAACTTGTAAGGATTCTGTTTCAAGCAAGGGCAGAAAAGGAAAAGTGATTATTATAGATATACTAATAAATGAAAAGGATGATGAGAAAGATATTACTCAACAAAATCTGATTATGGATATAAGTATGATGGCATTTGATGGTGGAAAAGAGAGAACTGAAAAAGAATGGAAGCACCTCTTCATTGAAGCAGGGTTCAAAGACTACAAAATATTTCCATTATTTTCCTATGAATCTCTTATTGAAGTCTATCCTTAG 1083 0.3583 MVSTNDQLEALELFQGQSLLYTHMYASLKPMSLKCAVQLNIPEIIYNHGKPITLPDLVSTLKVPLAKSSLVKRLMRFLAHIGIFAIHGKGEDDHDQTYALTPASKLLSKSCSKDHCLTPMVLMCTDPIFMSLFHQLGDLIHGEVPNLSEGALGVTLWEFLEEKPAYSSLFNEAMASNSQMVSLALKNCSEVFEGIESIVDVGGGNGTTAKIICEAFPKVKCLVFDVPHVVANSSCESQNVSYVGGDIFKSIPKADAIMLKSILHDWSDENCIKILKTCKDSVSSKGRKGKVIIIDILINEKDDEKDITQQNLIMDISMMAFDGGKERTEKEWKHLFIEAGFKDYKIFPLFSYESLIEVYP* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2711 360 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 359 IPR029063 -
Mtr1g2711 360 SUPERFAMILY "Winged helix" DNA-binding domain 12 110 IPR036390 -
Mtr1g2711 360 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 7 359 - -
Mtr1g2711 360 Pfam O-methyltransferase domain 133 342 IPR001077 GO:0008171
Mtr1g2711 360 Gene3D Vaccinia Virus protein VP39 111 360 IPR029063 -
Mtr1g2711 360 PANTHER O-METHYLTRANSFERASE 7 359 IPR016461 GO:0008168
Mtr1g2711 360 PIRSF O-mtase 2 360 IPR016461 GO:0008168
Mtr1g2711 360 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 360 IPR016461 GO:0008168
Mtr1g2711 360 Gene3D - 1 107 IPR036388 -
Mtr1g2711 360 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2711 Mtr-Chr1 38197406 38200877 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2711 3 346 Monolignol Biosynthesis Gene Families AT5G54160 33.239 4.40e-57 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2711 K22588 K13262 gmx:100819796 452.21