Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2695 ATGGAAGAAAGAGAGAATTTTGGAGCTGTGAATGTAGTGGGTGGTAATGAGGTTCCTGTGAGTTTTCAAGCTGCTCCAAGGATTGATAACAACTTGGATTTTTCCATGGCAACGGTGCCGGTGTCGTTGCCGGAGACAGCGTTGAAGAAGAAGAGGGGGAGACCAAGGAAGTATGGACCAGATGGTAAGCCTGCTCCTGGAGCTGTGACTGCCCTTTCGCCTATGCCGATTTCATCGTCGATACCGTTGACTGGAGAGTTCTCTGCTTGGAAAAGAGGTAGAGGGAAGCCTGTTGAATCTATGAAGAAATCATCTTTTAAGTTTGATTTTGAAAGTCCACCTGTGCAAGTTGTAGGTGGAGGTGTAAGTGAGGGAATTGCATACTCAGTAGGTGCCAACTTCACAGCTTATGTGCTTACAGTGAATTCTGGCGAGGATGTTACCATGAAAATTATGTCCTCCCAACAAGGATCACGTGCAATATGCATTCTCTCTGCCACTGGCACCATTTCAAATGTTACACTTCGTCAATCGACTTCTTCAGGGGGTACTTTAACATACGAGGGGCGGTTTGAGATTCTTTCCTTGTCTGGTTCCTTTATGCCAACTGAGAATGGAATTACAAGAAGCAGATCTGGTGGGATGAGTGTCTCTTTGGCGGGCCCAGATGGCCGAGTATTGGGTGGTGGACTCGCTGGTTTGCTTATAGCTTCTGGTCCCGTGCAGGTTGTTGTGGGAAGTTTTCTTCCTGGTCACCATCTGGAGCACAACAGCAAGAAGCAGAGGGTGGAGCATACTATATCAACTATTACTCATAATAATCCTCCTCCACATGTTAATCATCATGTGTCTAATGAAGTAAGTTTTGGTGGAGTGAAGCCTTTTATGACACCTGCTGCATTTCAAGAAGAGAATATTGTTTCTTTCAACAACAATGCTCAAGACTCTAGGAACACCTCATCTGCTGAAGACAGAGATCCTTTACCTGAAAAGGACTCTAATCATAGTCAATCAACTACTTGA 1023 0.4506 MEERENFGAVNVVGGNEVPVSFQAAPRIDNNLDFSMATVPVSLPETALKKKRGRPRKYGPDGKPAPGAVTALSPMPISSSIPLTGEFSAWKRGRGKPVESMKKSSFKFDFESPPVQVVGGGVSEGIAYSVGANFTAYVLTVNSGEDVTMKIMSSQQGSRAICILSATGTISNVTLRQSTSSGGTLTYEGRFEILSLSGSFMPTENGITRSRSGGMSVSLAGPDGRVLGGGLAGLLIASGPVQVVVGSFLPGHHLEHNSKKQRVEHTISTITHNNPPPHVNHHVSNEVSFGGVKPFMTPAAFQEENIVSFNNNAQDSRNTSSAEDRDPLPEKDSNHSQSTT* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2695 340 SUPERFAMILY AF0104/ALDC/Ptd012-like 133 252 - -
Mtr1g2695 340 Pfam Plants and Prokaryotes Conserved (PCC) domain 136 248 IPR005175 -
Mtr1g2695 340 MobiDBLite consensus disorder prediction 47 68 - -
Mtr1g2695 340 CDD DUF296 137 248 IPR005175 -
Mtr1g2695 340 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 11 330 IPR039605 GO:0003680
Mtr1g2695 340 Gene3D - 135 268 - -
Mtr1g2695 340 ProSiteProfiles PPC domain profile profile. 131 273 IPR005175 -
Mtr1g2695 340 MobiDBLite consensus disorder prediction 308 340 - -
Mtr1g2695 340 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 11 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2695 Mtr-Chr1 38114343 38119190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2695 48 253 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 68.421 8.00e-85 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2695 - - gmx:100789179 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2695 1 38114343 38119190 Mtr1g2695 1 38114343 38119190 ECH
Mtr6g1663 6 30759002 30764462 Mtr1g2695 1 38114343 38119190 PCT