Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2670 ATGGAAATCTACAGGGTAGATAATTCTTGGATAGTATTGAGGGATAAACTTCACCCCTCTGAAGGAACAAGTGTTAAGTCAGCTGAAAATGTTCCTTCAACTTCATTGGTAACTAAAATAAGGAAGAACTCTCAATCCTCTTCAAAATCCGATGCAAAAAAGGCCAAAACAGCTTTTACAAAAGTTTACAAATATGTAAGAAGAGGAAAAAAGATTCAAGAAGAGCCAAAGGAGATGCAAGAAGAACTCCCTATCACTCCACAAGAACCAAAAGTTCCTGCTTCTGAACTTGCTGATGTAGCAGATGTTAAGAAAGATGTGAAACAACATAGTGGAATAGGAATTTCGGATGAAGGATCTACAATTTTATCCGCTAGAAGAGCAAAAATTGCAGCTAGAAAAAAGTTTATCAGAACTGAATTAGCTCCTACTTCTCAACCTGACAAAGTCACAGTTGATGAAAAGAAAGACGATAAGCGCCCCCGGCTTGAAACATCCACTGAGACTCCAAAAATCAGATTTAAGCTCTATAATGCTGCTAGCCGCGATTTGACAACACTTTGTACTAAAGCCTTATCACGGAACAATAGCTCGCAAAATTCGTCAAAACCAGAATCATCTAGTCAGAAAATAGTGTTCAGGAATATTTCAAGGGACACTGAATCAAGGAAAGGAAAAGCTGCTGTGTGCGAGCCATTGAATTTGTCGGTGGAAACTACAAACAAAAACAAGTCTCCTAGTAACTCCACCGTGCAAGAAAATGGTGACATCCCAATGCTTGTGGACTCTAGTGACAATGACTCTCATCATGTGTCTAAGTTAACAGAAGCAGAAGGTGATCAAATTGAATCTATTCCTCCAAAATCGACTTCCTTGAAGATTAAGCTTAAAAGCGTGGCCAACCAAGAAAAGAGAGTAAAGTTCTCTGAGGACTTGAATCTCCCAGCCCTAGCTGAAAATGAAAGCAAGAAAGATTGTAATCCTATCTGGTTCTCCTTGGTTGCTTCCAAAGAGCAGGATGTTGGTGCACTGCCACAAATATCTTCTCCCTACATAATGGTCAGATTCCTCTTAACCAATCTTCACATTATTTATAGGAATGGAAGTTTACCTGTTTCTCATATCAAAAAGCACCTTGTGCAGAAGCTTGATCTTGCTAGTGAAGCTGAGGTAGAGATCTTATTAAGAGGTAAGCCAGTTTTATGTTCAATGCAGCTGCAAAACTTAGTGGAGATGTGGTTGGAAACAATGCCAAAGAATGAAAGGATTCAGACATCTGTTGGAAGCTCAGCTAAGGATTTTGTCATGGTCCTTTCGTACGGTCGAAAGGCTCCATGA 1338 0.3954 MEIYRVDNSWIVLRDKLHPSEGTSVKSAENVPSTSLVTKIRKNSQSSSKSDAKKAKTAFTKVYKYVRRGKKIQEEPKEMQEELPITPQEPKVPASELADVADVKKDVKQHSGIGISDEGSTILSARRAKIAARKKFIRTELAPTSQPDKVTVDEKKDDKRPRLETSTETPKIRFKLYNAASRDLTTLCTKALSRNNSSQNSSKPESSSQKIVFRNISRDTESRKGKAAVCEPLNLSVETTNKNKSPSNSTVQENGDIPMLVDSSDNDSHHVSKLTEAEGDQIESIPPKSTSLKIKLKSVANQEKRVKFSEDLNLPALAENESKKDCNPIWFSLVASKEQDVGALPQISSPYIMVRFLLTNLHIIYRNGSLPVSHIKKHLVQKLDLASEAEVEILLRGKPVLCSMQLQNLVEMWLETMPKNERIQTSVGSSAKDFVMVLSYGRKAP* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2670 445 MobiDBLite consensus disorder prediction 238 261 - -
Mtr1g2670 445 MobiDBLite consensus disorder prediction 193 215 - -
Mtr1g2670 445 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 13 444 IPR044807 GO:0004842
Mtr1g2670 445 MobiDBLite consensus disorder prediction 149 167 - -
Mtr1g2670 445 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIPH-RELATED 13 444 - -
Mtr1g2670 445 MobiDBLite consensus disorder prediction 238 286 - -
Mtr1g2670 445 MobiDBLite consensus disorder prediction 139 167 - -
Mtr1g2670 445 MobiDBLite consensus disorder prediction 193 218 - -
Mtr1g2670 445 MobiDBLite consensus disorder prediction 71 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2670 Mtr-Chr1 37708248 37710618 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2670 347 443 C3H Transcription Factor Family AT3G23060 43.000 6.18e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2670 K16277 - lja:Lj5g3v1204350.1 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2670 1 37708248 37710618 Mtr7g3772 7 54624164 54629743 ECH
Mtr1g2670 1 37708248 37710618 Mtr1g2670 1 37708248 37710618 ECH